Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0542100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:19874927:19876378:-1 gene:Os11g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0542100-01)
Sequence	ATGGCCGGAGGGGGCGAGTTCGTGGTGGCGGCGGAGGAGTACTACGGTGCGCTGGTGGCG AAGGCGGCGATGGCGAAGAATGGGTACAACTGCGGCGGCGCCGCGGTGGTTAGCGGCGGG GCGCAGAGCGGGCTGACGTGCAACAATGGCGGTGGAGGTGGGGTGGTGGTGTCGAGGAAG AGGGGGAGGGAGGTGGAGCAGCAGTACTACGTGCCGCCGTCGTCGGCGGTGCTGCTGCCG ATCCCGGGGATGGTGGTGGCGCCGGCGGCGGACGTCGCGGCGAGTCGGTTTGTGGAGTCC GGCATGGCGTGCACCAGCGGGCGCGCCGCGGCGGCGGCGTTTGGGGACGCGCTGGCGTCG GAGGTGTTCATCCAGAGCGGCGAGATCGACGCGGTGGTGCGGGCGGAGTGCGAACGGCTG CGCGCCGGGGTGGAGCAGGCGCGGAAGCGACAGTGCCAGGCGCTGGTGCGCGCCGCGGCG GCGGCGGCGTCGCGCCGCCTGCAGGAGACGGAGTCCCAGCTCGCGGCGGCGCGCCGCCGC GCCGCCGACCTGGAGGAGCGGCTCCGCCAGGCGGCCGCCGAGAGCCAGGCGTGGTGCGGC CTGGCGCGCAGCAACGAGGCCGTCGCCGCGGGGCTCCGCGCCACGCTCGACCACCTCCTC CTCCGCGCCGCCGCGGCGCCGCCGTGCGCCCCCGTCGAGGGCTGCGGCGAGTCCGACGGC CCGAACACCGCCGACGACGACGCGCAGTCGTGCTGCTTCGAGACGACGGCGACGAAGACG AACACGCGCCGTGGCGGCGGCGTCGGCGTCGGCGGAGGGAGGTGGGGGTGCAAGGCGTGC GGCGAGAGGGAGGCAGCGGTGCTGCTGCTGCCGTGCCGGCACCTGTGCCTGTGCAGGGCG TGCGAGGCGAGGGCGGAGGCGTGCCCGGTGTGCCTCGCCGTCAAGAAGGTCTCCGTCGTG GCGCGTTCGCCGGCGGACGTGTGA

Peptide Sequence

PEP ID	Os11t0542100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:19874927:19876378:-1 gene:Os11g0542100 transcript:Os11t0542100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0542100-01)
Sequence	MAGGGEFVVAAEEYYGALVAKAAMAKNGYNCGGAAVVSGGAQSGLTCNNGGGGGVVVSRK RGREVEQQYYVPPSSAVLLPIPGMVVAPAADVAASRFVESGMACTSGRAAAAAFGDALAS EVFIQSGEIDAVVRAECERLRAGVEQARKRQCQALVRAAAAAASRRLQETESQLAAARRR AADLEERLRQAAAESQAWCGLARSNEAVAAGLRATLDHLLLRAAAAPPCAPVEGCGESDG PNTADDDAQSCCFETTATKTNTRRGGGVGVGGGRWGCKACGEREAAVLLLPCRHLCLCRA CEARAEACPVCLAVKKVSVVARSPADV

Transcript Sequence

Transcript ID	Os11t0542100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19874927:19876378:-1 gene:Os11g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os11t0542100-01)
Sequence	ATTCTCATCTCGACTCGATCGATTGATCGGTGTTTCGATCTTGGAGAGGTTAATTATATT AAGCGAGCTCGATTCGATTGGTTCTTGGTTTTCCATGGCCGGAGGGGGCGAGTTCGTGGT GGCGGCGGAGGAGTACTACGGTGCGCTGGTGGCGAAGGCGGCGATGGCGAAGAATGGGTA CAACTGCGGCGGCGCCGCGGTGGTTAGCGGCGGGGCGCAGAGCGGGCTGACGTGCAACAA TGGCGGTGGAGGTGGGGTGGTGGTGTCGAGGAAGAGGGGGAGGGAGGTGGAGCAGCAGTA CTACGTGCCGCCGTCGTCGGCGGTGCTGCTGCCGATCCCGGGGATGGTGGTGGCGCCGGC GGCGGACGTCGCGGCGAGTCGGTTTGTGGAGTCCGGCATGGCGTGCACCAGCGGGCGCGC CGCGGCGGCGGCGTTTGGGGACGCGCTGGCGTCGGAGGTGTTCATCCAGAGCGGCGAGAT CGACGCGGTGGTGCGGGCGGAGTGCGAACGGCTGCGCGCCGGGGTGGAGCAGGCGCGGAA GCGACAGTGCCAGGCGCTGGTGCGCGCCGCGGCGGCGGCGGCGTCGCGCCGCCTGCAGGA GACGGAGTCCCAGCTCGCGGCGGCGCGCCGCCGCGCCGCCGACCTGGAGGAGCGGCTCCG CCAGGCGGCCGCCGAGAGCCAGGCGTGGTGCGGCCTGGCGCGCAGCAACGAGGCCGTCGC CGCGGGGCTCCGCGCCACGCTCGACCACCTCCTCCTCCGCGCCGCCGCGGCGCCGCCGTG CGCCCCCGTCGAGGGCTGCGGCGAGTCCGACGGCCCGAACACCGCCGACGACGACGCGCA GTCGTGCTGCTTCGAGACGACGGCGACGAAGACGAACACGCGCCGTGGCGGCGGCGTCGG CGTCGGCGGAGGGAGGTGGGGGTGCAAGGCGTGCGGCGAGAGGGAGGCAGCGGTGCTGCT GCTGCCGTGCCGGCACCTGTGCCTGTGCAGGGCGTGCGAGGCGAGGGCGGAGGCGTGCCC GGTGTGCCTCGCCGTCAAGAAGGTCTCCGTCGTGGCGCGTTCGCCGGCGGACGTGTGAAT ATTGTGACCGATATGAACTGTTCTTTTTAGTATCATTTTGAGAAGTTGTTTGTGCTGAAT GTGAAAATTTTGGGAGAATTTTGTCCATTCCCTGTACTCTCTTAGAAAAAAAGGGAATCT CTAGATCGATCCCCTTCTCACGCTCTCTTGGCTCCTCCTGTTTTGCAAATATGAAAATGT TTTTTTAAAAATTTTGTGTTCCGTATTCTTTTGTATAATCTTATATTTCATTTATTATTT TAAGAAATATAGATGGTAGAACATACAGTACATATTTATTTGATTACTTCGTGTTTAGTG CTCTACAATTGTGACTGATATGAATATTTTTGTACAACAAAATACTCCTAATAAACTTGA AAGTTTAGTGCT