Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0539800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:19709715:19716079:-1 gene:Os11g0539800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xaa-Pro aminopeptidase 1. (Os11t0539800-01)
Sequence	CATGAAAAGGCTAGGGGCATTATAATTGCTGCACTTGATGAGGTTGCTTGGTTGTACAAT ATTAGAGGAGATGATGTGCACTACAGCCCAGTGGTCCATTCTTATTCTATTGTAACCTTG CACAGTGCTTTCTTTTATGTGGATAAGAGAAAAGTATCTGTTGAGGTCCAGAACTACATG ACTGATAATGGTATCGATATCAAAGACTATAATATGGTTCAATCAGATGCAAGCTTGCTT GCATCTGGACAGCTAAAAGGTTCTGCAGTTAATGGTAGCTCGTATGGGGAAAATGATATG AATGAGAATTCAAAAGTTTGGATTGATTCAAATTCATGCTGTCTTGCACTGTACTCAAAA CTGGATCAAGATCAAGTTCTGATGCTGCAATCACCTATTGCTCTTCCAAAGGCTGTGAAG AATCCCGTGGAGCTGGATGGTTTGAGGAAGGCACATATTCGAGATGGTGCTGCTGTTGTG CAATACCTGGCTTGGCTTGACAATCAGATGCAAGAGAACTATGGAGCTTCTGGTTACTTT AGTGAGGCCAAGGGATCACAGAAAAAGCAGCATATGGAAGTAAAACTTACTGAGGTTTCT GTGAGTGATAAACTTGAAGGTTTCCGTGCATCTAAAGAGCACTTCAAAGGTCTGAGTTTC CCTACGATTTCATCCGTGGGACCAAATGCAGCAGTGATTCACTATTCACCTGAAGCAAGT TCATGTGCTGAACTTGATGCTGATAAAATATATCTCTGTGACTCTGGGGCTCAGTATCTT GATGGTACTACAGACATTACAAGAACTGTACATTTTGGGAAACCCTCTGAGCATGAGAAG TCATGCTACACAGCTGTTTTGAAAGGCCATATTGCACTAGACAGTGCTGTATTTCCCAAT GGAACGACAGGGCATGCTCTTGATATTCTCGCACGAACACCACTTTGGAGAAGCGGTCTG GACTATCGGCATGGCACAGGCCATGGAATTGGGTCTTATTTGAATGTTCATGAAGGTCCT CATCTAATTAGCTTCAGACCTTCTGCTAGAAATATACCACTACAAGCATCGATGACTGTA ACAGACGAACCTGGTTACTATGAAGATGGAAGCTTTGGTATAAGATTGGAGAATGTTCTG ATAGTTAAAGAGGCTAATACTAAATATAATTTCGGAGATAAGGGTTATTTGGCATTTGAA CATATAACATGGGCTCCATACCAGACAAAACTGATAGACACCACTTTGCTGACCCCGGCC GAGATTGAATGGGTAAACGCATATCACGCAGATTGCCGAAAAATTCTGCAACCATACCTG AACGAGCAGGAGAAGGAATGGCTGAGGAAAGCTACTGAGCCTATCGCTGTGAGCTGCTGT TAA

Peptide Sequence

PEP ID	Os11t0539800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:19709715:19716079:-1 gene:Os11g0539800 transcript:Os11t0539800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xaa-Pro aminopeptidase 1. (Os11t0539800-01)
Sequence	HEKARGIIIAALDEVAWLYNIRGDDVHYSPVVHSYSIVTLHSAFFYVDKRKVSVEVQNYM TDNGIDIKDYNMVQSDASLLASGQLKGSAVNGSSYGENDMNENSKVWIDSNSCCLALYSK LDQDQVLMLQSPIALPKAVKNPVELDGLRKAHIRDGAAVVQYLAWLDNQMQENYGASGYF SEAKGSQKKQHMEVKLTEVSVSDKLEGFRASKEHFKGLSFPTISSVGPNAAVIHYSPEAS SCAELDADKIYLCDSGAQYLDGTTDITRTVHFGKPSEHEKSCYTAVLKGHIALDSAVFPN GTTGHALDILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNIPLQASMTV TDEPGYYEDGSFGIRLENVLIVKEANTKYNFGDKGYLAFEHITWAPYQTKLIDTTLLTPA EIEWVNAYHADCRKILQPYLNEQEKEWLRKATEPIAVSCC

Transcript Sequence

Transcript ID	Os11t0539800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19709715:19716079:-1 gene:Os11g0539800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xaa-Pro aminopeptidase 1. (Os11t0539800-01)
Sequence	ACATGAAAAGGCTAGGGGCATTATAATTGCTGCACTTGATGAGGTTGCTTGGTTGTACAA TATTAGAGGAGATGATGTGCACTACAGCCCAGTGGTCCATTCTTATTCTATTGTAACCTT GCACAGTGCTTTCTTTTATGTGGATAAGAGAAAAGTATCTGTTGAGGTCCAGAACTACAT GACTGATAATGGTATCGATATCAAAGACTATAATATGGTTCAATCAGATGCAAGCTTGCT TGCATCTGGACAGCTAAAAGGTTCTGCAGTTAATGGTAGCTCGTATGGGGAAAATGATAT GAATGAGAATTCAAAAGTTTGGATTGATTCAAATTCATGCTGTCTTGCACTGTACTCAAA ACTGGATCAAGATCAAGTTCTGATGCTGCAATCACCTATTGCTCTTCCAAAGGCTGTGAA GAATCCCGTGGAGCTGGATGGTTTGAGGAAGGCACATATTCGAGATGGTGCTGCTGTTGT GCAATACCTGGCTTGGCTTGACAATCAGATGCAAGAGAACTATGGAGCTTCTGGTTACTT TAGTGAGGCCAAGGGATCACAGAAAAAGCAGCATATGGAAGTAAAACTTACTGAGGTTTC TGTGAGTGATAAACTTGAAGGTTTCCGTGCATCTAAAGAGCACTTCAAAGGTCTGAGTTT CCCTACGATTTCATCCGTGGGACCAAATGCAGCAGTGATTCACTATTCACCTGAAGCAAG TTCATGTGCTGAACTTGATGCTGATAAAATATATCTCTGTGACTCTGGGGCTCAGTATCT TGATGGTACTACAGACATTACAAGAACTGTACATTTTGGGAAACCCTCTGAGCATGAGAA GTCATGCTACACAGCTGTTTTGAAAGGCCATATTGCACTAGACAGTGCTGTATTTCCCAA TGGAACGACAGGGCATGCTCTTGATATTCTCGCACGAACACCACTTTGGAGAAGCGGTCT GGACTATCGGCATGGCACAGGCCATGGAATTGGGTCTTATTTGAATGTTCATGAAGGTCC TCATCTAATTAGCTTCAGACCTTCTGCTAGAAATATACCACTACAAGCATCGATGACTGT AACAGACGAACCTGGTTACTATGAAGATGGAAGCTTTGGTATAAGATTGGAGAATGTTCT GATAGTTAAAGAGGCTAATACTAAATATAATTTCGGAGATAAGGGTTATTTGGCATTTGA ACATATAACATGGGCTCCATACCAGACAAAACTGATAGACACCACTTTGCTGACCCCGGC CGAGATTGAATGGGTAAACGCATATCACGCAGATTGCCGAAAAATTCTGCAACCATACCT GAACGAGCAGGAGAAGGAATGGCTGAGGAAAGCTACTGAGCCTATCGCTGTGAGCTGCTG TTAAACCATCAACTAGCTGGTTGGCTCTACATGGACACATGGCACAGGGTCTCGACCGGC CATTCGTGCTAGATGTGCAGAACGACAAACGATTTGTGGCGTGCCATGCGTAGATAAATG GTTATCCCGCAATTCAATTGCTTGCAATAAGTGTGAACAGCAGAATAAACATCGCAATTG ATTCTTTGGCTTGTCATGCTGCTGAGGTTCATGTGAGGGACTTAGAAATAAAGCTAGGAC TGGAAAGCTTCCCTCCCATGAATCTGCAGGTTTCATGTGTACAGTTATATTGTTGGGTAT CGAGTGCCTAATATGATTTGCAATGAAAAATAAAGGGTTTG