Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0539500-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:19694790:19696368:-1 gene:Os11g0539500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0539500-00)
Sequence	ATGGCGTTAATCCATGGAAGCGAAGAAGTGATCTCCCATGAGGAGGACATGGTCGGAGCC TTCGCGCTGCTCTACCACCACGTGTTCAGCTACATCAAGCCCATGGCGCTCAAGTGCGCC GTGGAGCTCGGCATCCCCGACGCGATCCACCGCCGCGGCGGCGCCGCCACCCTGGCCAAC ATCGCCGCCGATACCGGCGTGCACGCGTCCAGACTCACCGACCTCCGGTGCCTCATGAAG CTGCTCACCACCTCGGGCATGTTCGCCGCCACCGCCGCCACGACCGACGGCGGCGAGGGC GAGCCCGCCGTCGCGACGTCGACCATGTACACGCTCACCGCAGCGTCCGGCCTCGTCGTC GGCCCGCGCGGGCTGTCCACCGTGGTGCGCTTCGCGGCGGGCCCCGTCGCCGTCTCCCCG TTCTTCGACATGCACGCATGGCTGCGCGCCGCGCCGGCGGCGGCGCCGCCCGCGGCGAGG TCGCTGTTCGAGCTGGCGCACGGGCGGTCCAGGTGGGACGCGGCGAACGCGGACAACGAC ACCATGAACGCGCACAGCTTCGTGGAGAGCCAGCTGCTGATCGAGGCCGTCCTCAGGGAC CACGCCGGCGTGTTCCGCGGGCTGCGCTCGCTGGTCGACGTCGGCGGCGGCCACGGCGCG GTCGCCAAGGCCATCGCCGCGGCCTTCCCGGACATCAAGTGCACCGTGATGGACCTCCCC CACGTCGTCGCCGACGCCCCCGTCTCCGACGACGGCAACCTGCATCTCGTCGCCGGCGAC ATGTTCCAATCCATTCCACCAGCGGACGCTGTTCTACTCAAATACGTGTTGCACTGCTGG GGAGACGACGACTGCGTGAGGATTCTCCGGAACTGCAGGGAGGCGATCCCGGCGAGGGAG GCCGGAGGGAAGGTGATCATAACGGAGCTGGTGCTGGGCTCGTCGGCGGCGTCGCGCGAC GCCAACGTGGCGGAGGCGGAGGACATGCACAGCCTCTTCCTCATGTGCATCAGTGGCGTC GGGCGGGAGGAGCGCGAGTGGAGGGCCATCTTCTCCGACGCCGGCTTCGGCGACTACAAG ATCACGCCGGTGTTGGGCCCTATCTCCGTTATCGAGGTCTACCCGTGA

Peptide Sequence

PEP ID	Os11t0539500-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:19694790:19696368:-1 gene:Os11g0539500 transcript:Os11t0539500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0539500-00)
Sequence	MALIHGSEEVISHEEDMVGAFALLYHHVFSYIKPMALKCAVELGIPDAIHRRGGAATLAN IAADTGVHASRLTDLRCLMKLLTTSGMFAATAATTDGGEGEPAVATSTMYTLTAASGLVV GPRGLSTVVRFAAGPVAVSPFFDMHAWLRAAPAAAPPAARSLFELAHGRSRWDAANADND TMNAHSFVESQLLIEAVLRDHAGVFRGLRSLVDVGGGHGAVAKAIAAAFPDIKCTVMDLP HVVADAPVSDDGNLHLVAGDMFQSIPPADAVLLKYVLHCWGDDDCVRILRNCREAIPARE AGGKVIITELVLGSSAASRDANVAEAEDMHSLFLMCISGVGREEREWRAIFSDAGFGDYK ITPVLGPISVIEVYP

Transcript Sequence

Transcript ID	Os11t0539500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19694790:19696368:-1 gene:Os11g0539500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Winged helix repressor DNA-binding domain containing protein. (Os11t0539500-00)
Sequence	ATGGCGTTAATCCATGGAAGCGAAGAAGTGATCTCCCATGAGGAGGACATGGTCGGAGCC TTCGCGCTGCTCTACCACCACGTGTTCAGCTACATCAAGCCCATGGCGCTCAAGTGCGCC GTGGAGCTCGGCATCCCCGACGCGATCCACCGCCGCGGCGGCGCCGCCACCCTGGCCAAC ATCGCCGCCGATACCGGCGTGCACGCGTCCAGACTCACCGACCTCCGGTGCCTCATGAAG CTGCTCACCACCTCGGGCATGTTCGCCGCCACCGCCGCCACGACCGACGGCGGCGAGGGC GAGCCCGCCGTCGCGACGTCGACCATGTACACGCTCACCGCAGCGTCCGGCCTCGTCGTC GGCCCGCGCGGGCTGTCCACCGTGGTGCGCTTCGCGGCGGGCCCCGTCGCCGTCTCCCCG TTCTTCGACATGCACGCATGGCTGCGCGCCGCGCCGGCGGCGGCGCCGCCCGCGGCGAGG TCGCTGTTCGAGCTGGCGCACGGGCGGTCCAGGTGGGACGCGGCGAACGCGGACAACGAC ACCATGAACGCGCACAGCTTCGTGGAGAGCCAGCTGCTGATCGAGGCCGTCCTCAGGGAC CACGCCGGCGTGTTCCGCGGGCTGCGCTCGCTGGTCGACGTCGGCGGCGGCCACGGCGCG GTCGCCAAGGCCATCGCCGCGGCCTTCCCGGACATCAAGTGCACCGTGATGGACCTCCCC CACGTCGTCGCCGACGCCCCCGTCTCCGACGACGGCAACCTGCATCTCGTCGCCGGCGAC ATGTTCCAATCCATTCCACCAGCGGACGCTGTTCTACTCAAATACGTGTTGCACTGCTGG GGAGACGACGACTGCGTGAGGATTCTCCGGAACTGCAGGGAGGCGATCCCGGCGAGGGAG GCCGGAGGGAAGGTGATCATAACGGAGCTGGTGCTGGGCTCGTCGGCGGCGTCGCGCGAC GCCAACGTGGCGGAGGCGGAGGACATGCACAGCCTCTTCCTCATGTGCATCAGTGGCGTC GGGCGGGAGGAGCGCGAGTGGAGGGCCATCTTCTCCGACGCCGGCTTCGGCGACTACAAG ATCACGCCGGTGTTGGGCCCTATCTCCGTTATCGAGGTCTACCCGTGAAATGGAATGAAA T