Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0539200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:19675012:19677815:1 gene:Os11g0539200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 2 description:Similar to Xyloglucan endotransglycosylase XET2 (Fragment). (Os11t0539200-01)
Sequence	ATGGCGACGACGACGGCGGCGGCGATGGTGGTGGCAATGTCGGTGCTGCTGCTGGGTGGC GGCGAGGCGGCGGCGCCGCGGAAGCCGGTGGACGTGGCGTTCGAGAAGAACTACGTGCCG ACGTGGGCGGAGGACCACATCCACTACGTGGACGGCGGGCGCGAGGTGCAGCTCTACCTC GACAAGTCCACCGGCACCGGCTTCCAGACCCGGGGCTCCTACCTCTTCGGCCACTTCAGC ATGCACATCAAGCTCGTCGCCGGCGACTCCGCCGGCACCGTCACCGCCTTCTACCTGTCG TCGCAGAACTCGGAGCACGACGAGATCGACTTCGAGTTCCTGGGGAACAGGACGGGGGAG CCGTACATCCTGCAGACGAACGTCTTCTCCGGCGGGAAGGGGGACCGGGAGCAGAGGATC TACCTCTGGTTCGACCCCACCAAGGACTACCACTCCTACTCCGTCCTCTGGAACCTCTAC ATGATCGCGTTCTTCGTGGACGACACGCCGATCAGGGTGTTCAAGAACAGCAAGGACCTG GGCGTGCGGTACCCGTTCAACCAGCCGATGAAGCTCTACTCCAGCCTGTGGAACGCCGAC GACTGGGCCACCCGCGGCGGGCGGGAGAAGACCGACTGGTCGCGGGCGCCGTTCGTCGCC TCCTACCGGGGCTTCCACGTCGATGGCTGCGAGGCGTCGGCGGAGGCCCGGTACTGCGCC ACCCAGGGCGCCCGGTGGTGGGACCAGCCGGAGTTCCGCGACCTCGACGCCGACCAGTAC CGCCGCCTCGCCTGGGTCCGCAAGACGCACACCATCTACAACTACTGCGACGACCGCGAA CGCTACCCCGCCATGTCGCCCGAGTGCCACCGCGACCGCGACGCCTGA

Peptide Sequence

PEP ID	Os11t0539200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:19675012:19677815:1 gene:Os11g0539200 transcript:Os11t0539200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 2 description:Similar to Xyloglucan endotransglycosylase XET2 (Fragment). (Os11t0539200-01)
Sequence	MATTTAAAMVVAMSVLLLGGGEAAAPRKPVDVAFEKNYVPTWAEDHIHYVDGGREVQLYL DKSTGTGFQTRGSYLFGHFSMHIKLVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGE PYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDL GVRYPFNQPMKLYSSLWNADDWATRGGREKTDWSRAPFVASYRGFHVDGCEASAEARYCA TQGARWWDQPEFRDLDADQYRRLAWVRKTHTIYNYCDDRERYPAMSPECHRDRDA

Transcript Sequence

Transcript ID	Os11t0539200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19675012:19677815:1 gene:Os11g0539200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 2 description:Similar to Xyloglucan endotransglycosylase XET2 (Fragment). (Os11t0539200-01)
Sequence	CACACAACCACCACTCACCACCAACATGGCGACGACGACGGCGGCGGCGATGGTGGTGGC AATGTCGGTGCTGCTGCTGGGTGGCGGCGAGGCGGCGGCGCCGCGGAAGCCGGTGGACGT GGCGTTCGAGAAGAACTACGTGCCGACGTGGGCGGAGGACCACATCCACTACGTGGACGG CGGGCGCGAGGTGCAGCTCTACCTCGACAAGTCCACCGGCACCGGCTTCCAGACCCGGGG CTCCTACCTCTTCGGCCACTTCAGCATGCACATCAAGCTCGTCGCCGGCGACTCCGCCGG CACCGTCACCGCCTTCTACCTGTCGTCGCAGAACTCGGAGCACGACGAGATCGACTTCGA GTTCCTGGGGAACAGGACGGGGGAGCCGTACATCCTGCAGACGAACGTCTTCTCCGGCGG GAAGGGGGACCGGGAGCAGAGGATCTACCTCTGGTTCGACCCCACCAAGGACTACCACTC CTACTCCGTCCTCTGGAACCTCTACATGATCGCGTTCTTCGTGGACGACACGCCGATCAG GGTGTTCAAGAACAGCAAGGACCTGGGCGTGCGGTACCCGTTCAACCAGCCGATGAAGCT CTACTCCAGCCTGTGGAACGCCGACGACTGGGCCACCCGCGGCGGGCGGGAGAAGACCGA CTGGTCGCGGGCGCCGTTCGTCGCCTCCTACCGGGGCTTCCACGTCGATGGCTGCGAGGC GTCGGCGGAGGCCCGGTACTGCGCCACCCAGGGCGCCCGGTGGTGGGACCAGCCGGAGTT CCGCGACCTCGACGCCGACCAGTACCGCCGCCTCGCCTGGGTCCGCAAGACGCACACCAT CTACAACTACTGCGACGACCGCGAACGCTACCCCGCCATGTCGCCCGAGTGCCACCGCGA CCGCGACGCCTGAGATCTCATCGAGATCTGTGATCGATGCTTGCTGGCCGTCCGATGGAT GGATGGATGGATGGG