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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0537350-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:19585671:19586377:1 gene:Os11g0537350 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 11-1 description:Similar to predicted protein. (Os11t0537350-00)
Sequence

ATGAAGCTCTCCACTGTCCTGTGTTGTTACCTTCTTCTCCTTGGTCTCTTTGCTCCAGAA
ATCATATCAGATAGCCCTCCTCTTCAGGATGTATGCCCTATGGCACCCCAGGGTGAGAGG
AAACTCTTCATGAATGGTTTCTTCTGCAAGAGCCCAAGCACCATAATGGCCTCTGATTTC
AAGACATTGCTGCTCAACCATGCCGGGGACCTGGACAACATGGTCCGGTCATCGGCGAAC
ATCATCACCGCCACCGAGTTCCCTGGCCTGAACACCCTTGGCATTTCAATGGCGCGGACC
GACATCGCGGTCAGCGGGGCGGTGCTTCCCCATTCCCACCCAAGAGCTTCAGAGATGATG
TTTGTTCACAGTGGAAGTGTGGTGGCAGGCTTCTTTGACACCAAGGGGAAGCTGTTTCAG
AAGACCCTTGCTGAGGGGGATGTCTTCATCTTCCCCAGAGGTCTGGTCCATTTCATCATG
AACTATGGTTTTGGCCTTGCGACAACTTTTTCGGTACTCAACAGTCAGAACCCTGGTGTT
GTTGGGATCACCCATGCGATGTTTGCGCCAGATTCAGAGGTAGCTGAAGGGCTGATGGCC
AGGATGTTGAGTTTCAGAGATATGGGAATGGATGACAGTAGTAGTGTTGATTCACCATGG
TTTTACTGA

Peptide Sequence

PEP ID

Os11t0537350-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:19585671:19586377:1 gene:Os11g0537350 transcript:Os11t0537350-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 11-1 description:Similar to predicted protein. (Os11t0537350-00)
Sequence

MKLSTVLCCYLLLLGLFAPEIISDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDF
KTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMM
FVHSGSVVAGFFDTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGV
VGITHAMFAPDSEVAEGLMARMLSFRDMGMDDSSSVDSPWFY

Transcript Sequence

Transcript ID

Os11t0537350-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:19585671:19586377:1 gene:Os11g0537350 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 11-1 description:Similar to predicted protein. (Os11t0537350-00)
Sequence

AACAATTCCATGACATGAAGCTCTCCACTGTCCTGTGTTGTTACCTTCTTCTCCTTGGTC
TCTTTGCTCCAGAAATCATATCAGATAGCCCTCCTCTTCAGGATGTATGCCCTATGGCAC
CCCAGGGTGAGAGGAAACTCTTCATGAATGGTTTCTTCTGCAAGAGCCCAAGCACCATAA
TGGCCTCTGATTTCAAGACATTGCTGCTCAACCATGCCGGGGACCTGGACAACATGGTCC
GGTCATCGGCGAACATCATCACCGCCACCGAGTTCCCTGGCCTGAACACCCTTGGCATTT
CAATGGCGCGGACCGACATCGCGGTCAGCGGGGCGGTGCTTCCCCATTCCCACCCAAGAG
CTTCAGAGATGATGTTTGTTCACAGTGGAAGTGTGGTGGCAGGCTTCTTTGACACCAAGG
GGAAGCTGTTTCAGAAGACCCTTGCTGAGGGGGATGTCTTCATCTTCCCCAGAGGTCTGG
TCCATTTCATCATGAACTATGGTTTTGGCCTTGCGACAACTTTTTCGGTACTCAACAGTC
AGAACCCTGGTGTTGTTGGGATCACCCATGCGATGTTTGCGCCAGATTCAGAGGTAGCTG
AAGGGCTGATGGCCAGGATGTTGAGTTTCAGAGATATGGGAATGGATGACAGTAGTAGTG
TTGATTCACCATGGTTTTACTGATCATATTGGGTTATTCAATATAGT