Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0534300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:19481652:19484228:-1 gene:Os11g0534300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA261 description:Zinc finger, DHHC-type domain containing protein. (Os11t0534300-01)
Sequence	ATGTTGAAGGTGAGGTGGTTGCCGTTCAAGAAGACCCATCTCGCCCGCAGCAACGCCTCC GACGCGTCCTCCCCCACCTCCGCCGCCGCCGCCACCGCCACCGCCGTCACCACCCACCGC CTCTACCAAGTCTGGAGGGGCAGGAACAGATTCCTGTGCGGCGGGCGGCTCATCTTCGGC CCGGACGCCAGCTCCATCGTGCTCACCGTGTCGCTCATCATGACGCCGCTCGCGCTCTTT GTCGCCTTCGTCTCCTTCCACCTCGCCGCCCTCATCGGGAAGCCGCTCGGCCAGGCCGTC CCGGCCGTCGCCATCGCCGTCGGCGTATTCGACGTGATCGTGCTGGTGATGACGTCGGGG CGGGACCCGGGGATCATCCCGCGGAACGTGCGGCCGCCGGAGCCCGAGGACATCGGCGTG TCGTCGCCGGCGTTCGGCGGCGGCGGGTCGCTCCCGCCGACGCGCGACGTGTACGTGAAC GGCGTGGTGGTGAAGGTGAAATACTGCCACACCTGCCTCCTCTACCGCCCCCCTCGCTGC TCCCACTGCTCCGTCTGCAACAACTGCGTCGATCGCTTCGACCACCACTGCCCCTGGGTC GGCCAGTGCATCGGCAAGAGGAACTACAGGTTCTTCTTCATGTTCATCTCGTCGACGACG TTCCTGTGCCTGTACGTGTTCGTCTTCTGCTGGGTGAACCTGGCGATGACCGCGAGGCAG TTCGGCTGCAGCATGGGGCGCGCGGTGGTGGAGTCGCCGGTGTCGGGGATCCTCATCGTG TACACGTTCGTGACGGCGTGGTTCGTCGGCGGCCTCACCGCGTTCCACTCCTACCTCGTC TGCACCAACCAGACCACGTACGAGAACTTCCGCTACAGGTACGAGCGGAAGGCGAACCCG CACAACCGCGGCGTCGCCAAGAACGTCGCCGAGATCTTCCTCTCGCCGATCCCGCCGAGC CGGAACGACTTCCGGTCAAGGGTCGCCGTCGAGCACTACTACGCCGCCGGCGCCGGGGCG GCGTCGGGGCAGTACTTCTACTCCTACTCGATCGGGCCGCTCTCGTCGGAGTCCAAGGCG GCCAGCTTCAACACGCGGGGGAGCCTCAGCTTCGACATGGCCACGGCGAGCTTCGACCTC GGCGGCGTCGGCGTCGGCGGCGGCGTCGGAGGATACTCCGCCAAGCGCACCAGCGTCGAC GTCTGCTCCAACTCCTCCGACTTCGGCGACATCTACGGCGGCGAGCAGCAGCCGCCGCGG CACTCCATCTTCGGCGGCGACGGCGGAGGAGGGAGGACGAGCGTCAGGAAGGCCGACGAC GTCCCGACGGAGTTCGGGCACTACGGCGCCGCCGCTGCCGCCGCCGCCGGCGGCGGCGGC GGCCGGCCTCGCGGGAGGGAGTTCGAGGCCGTGTGA

Peptide Sequence

PEP ID	Os11t0534300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:19481652:19484228:-1 gene:Os11g0534300 transcript:Os11t0534300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA261 description:Zinc finger, DHHC-type domain containing protein. (Os11t0534300-01)
Sequence	MLKVRWLPFKKTHLARSNASDASSPTSAAAATATAVTTHRLYQVWRGRNRFLCGGRLIFG PDASSIVLTVSLIMTPLALFVAFVSFHLAALIGKPLGQAVPAVAIAVGVFDVIVLVMTSG RDPGIIPRNVRPPEPEDIGVSSPAFGGGGSLPPTRDVYVNGVVVKVKYCHTCLLYRPPRC SHCSVCNNCVDRFDHHCPWVGQCIGKRNYRFFFMFISSTTFLCLYVFVFCWVNLAMTARQ FGCSMGRAVVESPVSGILIVYTFVTAWFVGGLTAFHSYLVCTNQTTYENFRYRYERKANP HNRGVAKNVAEIFLSPIPPSRNDFRSRVAVEHYYAAGAGAASGQYFYSYSIGPLSSESKA ASFNTRGSLSFDMATASFDLGGVGVGGGVGGYSAKRTSVDVCSNSSDFGDIYGGEQQPPR HSIFGGDGGGGRTSVRKADDVPTEFGHYGAAAAAAAGGGGGRPRGREFEAV

Transcript Sequence

Transcript ID	Os11t0534300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19481652:19484228:-1 gene:Os11g0534300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA261 description:Zinc finger, DHHC-type domain containing protein. (Os11t0534300-01)
Sequence	TTTCTCTTCCTCCTTCCTTCCACCTCACCCCAACCCCAACCCCAACCCTGGCCCCGTCCC GCGCGTACGGAGGAGGGGCCCATGCATGCATGCGGGTGAGGTGACAAGGACGCGGCCACG GGGATCACCGGCGCACCGACCGGGATGTTGAAGGTGAGGTGGTTGCCGTTCAAGAAGACC CATCTCGCCCGCAGCAACGCCTCCGACGCGTCCTCCCCCACCTCCGCCGCCGCCGCCACC GCCACCGCCGTCACCACCCACCGCCTCTACCAAGTCTGGAGGGGCAGGAACAGATTCCTG TGCGGCGGGCGGCTCATCTTCGGCCCGGACGCCAGCTCCATCGTGCTCACCGTGTCGCTC ATCATGACGCCGCTCGCGCTCTTTGTCGCCTTCGTCTCCTTCCACCTCGCCGCCCTCATC GGGAAGCCGCTCGGCCAGGCCGTCCCGGCCGTCGCCATCGCCGTCGGCGTATTCGACGTG ATCGTGCTGGTGATGACGTCGGGGCGGGACCCGGGGATCATCCCGCGGAACGTGCGGCCG CCGGAGCCCGAGGACATCGGCGTGTCGTCGCCGGCGTTCGGCGGCGGCGGGTCGCTCCCG CCGACGCGCGACGTGTACGTGAACGGCGTGGTGGTGAAGGTGAAATACTGCCACACCTGC CTCCTCTACCGCCCCCCTCGCTGCTCCCACTGCTCCGTCTGCAACAACTGCGTCGATCGC TTCGACCACCACTGCCCCTGGGTCGGCCAGTGCATCGGCAAGAGGAACTACAGGTTCTTC TTCATGTTCATCTCGTCGACGACGTTCCTGTGCCTGTACGTGTTCGTCTTCTGCTGGGTG AACCTGGCGATGACCGCGAGGCAGTTCGGCTGCAGCATGGGGCGCGCGGTGGTGGAGTCG CCGGTGTCGGGGATCCTCATCGTGTACACGTTCGTGACGGCGTGGTTCGTCGGCGGCCTC ACCGCGTTCCACTCCTACCTCGTCTGCACCAACCAGACCACGTACGAGAACTTCCGCTAC AGGTACGAGCGGAAGGCGAACCCGCACAACCGCGGCGTCGCCAAGAACGTCGCCGAGATC TTCCTCTCGCCGATCCCGCCGAGCCGGAACGACTTCCGGTCAAGGGTCGCCGTCGAGCAC TACTACGCCGCCGGCGCCGGGGCGGCGTCGGGGCAGTACTTCTACTCCTACTCGATCGGG CCGCTCTCGTCGGAGTCCAAGGCGGCCAGCTTCAACACGCGGGGGAGCCTCAGCTTCGAC ATGGCCACGGCGAGCTTCGACCTCGGCGGCGTCGGCGTCGGCGGCGGCGTCGGAGGATAC TCCGCCAAGCGCACCAGCGTCGACGTCTGCTCCAACTCCTCCGACTTCGGCGACATCTAC GGCGGCGAGCAGCAGCCGCCGCGGCACTCCATCTTCGGCGGCGACGGCGGAGGAGGGAGG ACGAGCGTCAGGAAGGCCGACGACGTCCCGACGGAGTTCGGGCACTACGGCGCCGCCGCT GCCGCCGCCGCCGGCGGCGGCGGCGGCCGGCCTCGCGGGAGGGAGTTCGAGGCCGTGTGA CGTCGCCGCCGCCGTCGTCTCCAAGTGCGTTGGCGCCATTTTCTTGGGAGCTCGACGATG CAACGCAGCTAATTAATCGATCAATTAATGTAGCGAATTTTTCTCTGTTTTTTTTTGGTG ATCTTGTGCTTCCGCTGCTCGTGTGTTGTGTAGTAGCTTTGGTTGATCAGCTTCCTCATG CTTGCTAATGGAGTAGTGGTTTCCATAGCATTCTAGTACTACTTGCTTAACTTGATTTAG TGAAGGTGATGTATACACACACAAATGCACACACACATGGGTTTAATTTTGTGTAATTAG GACTGTGCATATATATAAACGGTGTTCATGAGTTATCCAAACATTATCTTTTGGC