Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0533400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:19430389:19431158:-1 gene:Os11g0533400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0533400-01)
Sequence

ATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGCCGCCGCCGCGGCGGTGTCCGTCCCC
GGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGGCGAAGAAGCCGGCGGGGGAC
TACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGTCGGTGTCGCTGGGCCTGGCG
ACGGCGAGGCAGCAGCTGGCGCACGCGCCCAACGTGCGGCTCGACAAGAAGAAGCGGGAG
ACGGTGCCCGAGGTGGCGGCGCCGGACATGGCGCTCGACGAGGCGGAGCGGTTCGTCGGC
GGGTCGCTGTTCCGCAAGGTGGCGCACGTGCAGGACGACGCCTCGCTCCGCGCCGGCGTC
GCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCGTCACCCTCAAGGACGCCGGC
GTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCCTCGAGGTGTTGGGGAAGAAG
ACCAAGCCCGCCGCCGCTGCTTGA

Peptide Sequence

PEP ID

Os11t0533400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:19430389:19431158:-1 gene:Os11g0533400 transcript:Os11t0533400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0533400-01)
Sequence

MMASRVSSLLRAAAAAVSVPGRSRSLSAAAATAAKKPAGDYVPVYVAMGMIAVSVSLGLA
TARQQLAHAPNVRLDKKKRETVPEVAAPDMALDEAERFVGGSLFRKVAHVQDDASLRAGV
AADPVAEYPARKAVTLKDAGVEPPGIEQGREGILEVLGKKTKPAAAA

Transcript Sequence

Transcript ID

Os11t0533400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:19430389:19431158:-1 gene:Os11g0533400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0533400-01)
Sequence

ATCTCAGGCAAGGCAAACCGCTCAACTCTCTCCGCTCCAAACGACTAGCTCGATCACTTG
CTAGCTGCCTAGCTCCCACCATGATGGCTTCGCGAGTCTCCTCCCTCCTCCGCGCCGCCG
CCGCGGCGGTGTCCGTCCCCGGCCGCTCCCGCTCACTCTCCGCCGCAGCGGCGACGGCGG
CGAAGAAGCCGGCGGGGGACTACGTGCCGGTGTACGTGGCGATGGGGATGATCGCGGTGT
CGGTGTCGCTGGGCCTGGCGACGGCGAGGCAGCAGCTGGCGCACGCGCCCAACGTGCGGC
TCGACAAGAAGAAGCGGGAGACGGTGCCCGAGGTGGCGGCGCCGGACATGGCGCTCGACG
AGGCGGAGCGGTTCGTCGGCGGGTCGCTGTTCCGCAAGGTGGCGCACGTGCAGGACGACG
CCTCGCTCCGCGCCGGCGTCGCCGCCGACCCCGTCGCCGAGTACCCGGCCAGGAAGGCCG
TCACCCTCAAGGACGCCGGCGTCGAGCCCCCCGGCATCGAGCAGGGCAGGGAGGGGATCC
TCGAGGTGTTGGGGAAGAAGACCAAGCCCGCCGCCGCTGCTTGAAGCTGAAGCGTGTGAT
ATAATTGCAGTTAATTAGTAGTGGGTTAATCTGGGTTCTCCTTGCTTTAATTAGTTTTAT
TTGCTTAATTACTGGTTGCTTTGTTTTAGTCTTTCAAACCGGCTGTACTTTTATGAAGTC
GATGTGTGTGTTGGGGAACTGCTTGTACATATGTCAATCCAGCTTTGATG