Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0530600-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:19277597:19281006:-1 gene:Os11g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHALCONE SYNTHASE description:Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2). (Os11t0530600-01)
Sequence	ATGGCGGCGGCGGTGACGGTGGAGGAGGTGAGGAGGGCGCAGAGGGCGGAGGGGCCGGCG ACGGTGCTGGCGATCGGGACGGCGACGCCGGCGAACTGCGTGTACCAGGCCGACTACCCG GACTACTACTTCAGGATCACCAAGAGCGAGCACATGGTCGAGCTCAAGGAGAAGTTCAAG AGGATGTGTGACAAGTCGCAGATCAGGAAGAGGTACATGCACCTGACGGAGGAGATCCTG CAGGAGAACCCCAACATGTGCGCGTACATGGCGCCGTCGCTGGACGCGCGGCAGGACATC GTCGTCGTCGAGGTCCCCAAGCTGGGGAAGGCGGCGGCGCAGAAGGCGATCAAGGAGTGG GGGCAGCCGCGCTCCCGCATCACCCACCTCGTCTTCTGCACCACCTCCGGCGTCGACATG CCCGGCGCCGACTACCAGCTCGCCAAGATGCTCGGCCTGAGGCCCAACGTGAACCGCCTC ATGATGTACCAGCAGGGGTGCTTCGCCGGCGGCACGGTGCTCCGCGTCGCCAAGGACCTC GCCGAGAACAACCGCGGCGCGCGCGTCCTCGCCGTGTGCTCCGAGATCACGGCGGTGACG TTCCGGGGGCCCTCCGAGTCCCACCTCGACTCCATGGTCGGGCAGGCGCTGTTCGGCGAC GGCGCGGCGGCGGTGATCGTCGGCTCCGACCCCGACGAGGCCGTCGAGCGGCCGCTGTTC CAGATGGTGTCGGCGAGCCAGACCATCCTCCCGGACAGCGAGGGCGCCATCGACGGCCAC CTGAGGGAGGTCGGGCTGACGTTCCACCTGCTCAAGGACGTGCCGGGGCTCATCTCGAAG AACATCGAGCGCGCGCTGGGCGACGCGTTCACACCGCTGGGGATCTCGGACTGGAACTCC ATCTTCTGGGTGGCGCACCCCGGAGGTCCGGCGATCCTGGACCAGGTGGAGGCGAAGGTT GGGCTGGACAAGGAGAGGATGAGGGCGACGCGCCACGTGCTGTCCGAGTACGGCAACATG TCGAGCGCCTGCGTGCTCTTCATCCTCGACGAGATGCGCAAGCGCTCCGCCGAGGACGGC CACGCCACCACCGGCGAGGGCATGGACTGGGGCGTCCTCTTCGGCTTCGGCCCCGGCCTC ACCGTTGAGACCGTCGTCCTCCACAGCGTCCCCATCACCGCCGGCGCCGCCGCCTGA

Peptide Sequence

PEP ID	Os11t0530600-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:19277597:19281006:-1 gene:Os11g0530600 transcript:Os11t0530600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHALCONE SYNTHASE description:Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2). (Os11t0530600-01)
Sequence	MAAAVTVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFK RMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEW GQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDL AENNRGARVLAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAVERPLF QMVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNS IFWVAHPGGPAILDQVEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG HATTGEGMDWGVLFGFGPGLTVETVVLHSVPITAGAAA

Transcript Sequence

Transcript ID	Os11t0530600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19277597:19281006:-1 gene:Os11g0530600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHALCONE SYNTHASE description:Similar to Chalcone synthase C2 (EC 2.3.1.74) (Naringenin-chalcone synthase C2). (Os11t0530600-01)
Sequence	GCAGCAGCAAGCAGCGCACAAGCCCCAGCACCAGCAAGCTGCTACTCATCATCAGCGAGA GCTAGCTAGCTGTGTGTGCCACTTACACTGCTGCTGCTGCTGGTTCTAGCTAAGCTCACC GATCGTCGTCTTCGTCATCGCCGGTGACCTGGTGAATTAGTCGAGAGAGATGGCGGCGGC GGTGACGGTGGAGGAGGTGAGGAGGGCGCAGAGGGCGGAGGGGCCGGCGACGGTGCTGGC GATCGGGACGGCGACGCCGGCGAACTGCGTGTACCAGGCCGACTACCCGGACTACTACTT CAGGATCACCAAGAGCGAGCACATGGTCGAGCTCAAGGAGAAGTTCAAGAGGATGTGTGA CAAGTCGCAGATCAGGAAGAGGTACATGCACCTGACGGAGGAGATCCTGCAGGAGAACCC CAACATGTGCGCGTACATGGCGCCGTCGCTGGACGCGCGGCAGGACATCGTCGTCGTCGA GGTCCCCAAGCTGGGGAAGGCGGCGGCGCAGAAGGCGATCAAGGAGTGGGGGCAGCCGCG CTCCCGCATCACCCACCTCGTCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCCGA CTACCAGCTCGCCAAGATGCTCGGCCTGAGGCCCAACGTGAACCGCCTCATGATGTACCA GCAGGGGTGCTTCGCCGGCGGCACGGTGCTCCGCGTCGCCAAGGACCTCGCCGAGAACAA CCGCGGCGCGCGCGTCCTCGCCGTGTGCTCCGAGATCACGGCGGTGACGTTCCGGGGGCC CTCCGAGTCCCACCTCGACTCCATGGTCGGGCAGGCGCTGTTCGGCGACGGCGCGGCGGC GGTGATCGTCGGCTCCGACCCCGACGAGGCCGTCGAGCGGCCGCTGTTCCAGATGGTGTC GGCGAGCCAGACCATCCTCCCGGACAGCGAGGGCGCCATCGACGGCCACCTGAGGGAGGT CGGGCTGACGTTCCACCTGCTCAAGGACGTGCCGGGGCTCATCTCGAAGAACATCGAGCG CGCGCTGGGCGACGCGTTCACACCGCTGGGGATCTCGGACTGGAACTCCATCTTCTGGGT GGCGCACCCCGGAGGTCCGGCGATCCTGGACCAGGTGGAGGCGAAGGTTGGGCTGGACAA GGAGAGGATGAGGGCGACGCGCCACGTGCTGTCCGAGTACGGCAACATGTCGAGCGCCTG CGTGCTCTTCATCCTCGACGAGATGCGCAAGCGCTCCGCCGAGGACGGCCACGCCACCAC CGGCGAGGGCATGGACTGGGGCGTCCTCTTCGGCTTCGGCCCCGGCCTCACCGTTGAGAC CGTCGTCCTCCACAGCGTCCCCATCACCGCCGGCGCCGCCGCCTGAGCGCTCCGCCCTGG TCGCCGCCGGCCGGCCTACGTACGCCACACGTCATCTTTTATCATCGATCATAAAAAAAA ATTATATATATATCGATATCGATATATATATATTTCCTAATAATAACTACTACTACAATA ACAACGTTATCGAATTAAAAAGTTATTCCCTTTTGCCGTGTGTTGGTAGGGATAAAAAGT GAAAAAAAAAATTATTACTTTGTTTTGCATGTGTCATGTATGGGTGGTTTGGTTGGTAGT AGCATATATATGTATACTGAAAAGAGAAAGGGAGGTCAATTAAGTGTCATGGATGGTGAG GTTTATTGTAAACCTGTGTAAGAGATGCTTGGCTGTTACTATTCAATTTGAAAACTTAAT TAATTTTGTGTACCT