Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0528500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:19180636:19182258:-1 gene:Os11g0528500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rubredoxin 1 (Rd-1). (Os11t0528500-01)
Sequence

ATGGCCGCCCTGCAGCTGCAGGCGCTGCGCGCGCCCGCCGCCGCCGCGGCGCCGCTCCGG
TCGTCATCGTTCTGCACGCCGCTGTCGCTGCCGGCGCCGGCGCCGCCGCGGCGCGGCGCC
AGGGCGTCGACGGCGTCGGCGAGGATCACGATGCGCTTCGGCGTCGCGTCCAAGCAGGCC
TACATCTGCCGCGACTGCGGGTACATCTACAGCGACAGGACCCCCTTCGACAAGCTTCCC
GACAAGTACTTCTGCCCCGTTTGTGGAGCACCAAAGAGAAGGTTCAAGCCGTACGAGCCT
AAGGTGGCCAAGAACGCCAACGCCACCGATGCCCGCAAGGCTAGGAAGGAGCAGCTGAAA
AAGGACGAAGCCGTCGGGCAAGCGTTGCCTATCGGTATCGCCGTCGGGATACTTGCATTG
GCCGGCTTGTTCTTCTACTTGAACAGTGTCTACTAG

Peptide Sequence

PEP ID

Os11t0528500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:19180636:19182258:-1 gene:Os11g0528500 transcript:Os11t0528500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rubredoxin 1 (Rd-1). (Os11t0528500-01)
Sequence

MAALQLQALRAPAAAAAPLRSSSFCTPLSLPAPAPPRRGARASTASARITMRFGVASKQA
YICRDCGYIYSDRTPFDKLPDKYFCPVCGAPKRRFKPYEPKVAKNANATDARKARKEQLK
KDEAVGQALPIGIAVGILALAGLFFYLNSVY

Transcript Sequence

Transcript ID

Os11t0528500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:19180636:19182258:-1 gene:Os11g0528500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rubredoxin 1 (Rd-1). (Os11t0528500-01)
Sequence

ATCCTCCCCTCTCTTCCACCGCTTCTTCTTCCTCCAGTCCCCCCACATTGCTTTCCTACC
TTCTCTTCTTCTCTCCTCGGATCTCGAGCTCGCCACGCGCCTGTTTCTTGTGCTGCGGTG
AGCGGTGGTGATGGCCGCCCTGCAGCTGCAGGCGCTGCGCGCGCCCGCCGCCGCCGCGGC
GCCGCTCCGGTCGTCATCGTTCTGCACGCCGCTGTCGCTGCCGGCGCCGGCGCCGCCGCG
GCGCGGCGCCAGGGCGTCGACGGCGTCGGCGAGGATCACGATGCGCTTCGGCGTCGCGTC
CAAGCAGGCCTACATCTGCCGCGACTGCGGGTACATCTACAGCGACAGGACCCCCTTCGA
CAAGCTTCCCGACAAGTACTTCTGCCCCGTTTGTGGAGCACCAAAGAGAAGGTTCAAGCC
GTACGAGCCTAAGGTGGCCAAGAACGCCAACGCCACCGATGCCCGCAAGGCTAGGAAGGA
GCAGCTGAAAAAGGACGAAGCCGTCGGGCAAGCGTTGCCTATCGGTATCGCCGTCGGGAT
ACTTGCATTGGCCGGCTTGTTCTTCTACTTGAACAGTGTCTACTAGATGGAGAAACATAC
GAGATGATCGATCCACTGCAGTGGGGGAAAAGCATCAAAGAGTTTTAAATTTTGCCTTCT
TTTCAAACGTGCTGTTATATGCTTCTAGGAAATCCATGGCAAGTTTCTGTATCTTAGAGA
AGAAACTACACTTTTTTAGGGGTGAAGATATCCATCCCCTATATTATTGACAACAAATTG
ACTTCTCATTGTGCCGCATCGTCGGCAAATTAAAGCCTGTTTGATCATCCTACGATG