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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0528300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:19172896:19174910:1 gene:Os11g0528300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF339 family protein. (Os11t0528300-01)
Sequence

ATGGCGGCCGCGCTCCTCCGCCGCGCGCTCCACCTCCACCTCCACCTCCGCCGCGCGCTC
CCCTCCCCTCCCCGCGCCGGCGCGCTCCTCCTCCCCGCCGCCGCTTCCTCCCCCGCCCAC
CGCTTCCTCTCCGGCTTCACCACCACCACCCAGCAGAACAGCGCCTCCACCACCACCATC
GACCTCTCCTCCGACGAGAGCCGCCGCCGCCTCATCAACAGGCTGGTGTACAGGAGCAAG
CAGCGGGGGTTCTTGGAGCTGGACCTGGTGCTCGGGACCTGGGTCGAGCAGCACATCCAC
TCCATGGACGAGGCCAACATCCGCGCCCTGCTCCAAGTCCTCGACCTCGAAAACCCAGAT
TTGTGGAAGTGGCTTACTAGTCAGGAACAACCACCCGAGGCAGTGAACTCTAATCCTGTA
TTTATCGCTGTTAAATCGAAGGTCACGGACAACCTGAGCAAGCACTCTTCTCCTGAGACC
AGATCAGCACCTGGTCAGCCATGGGTGAGAGGGTGGGATGACAAGCGAGGCATTGAAGGA
CCAAAGTATGGAAATCAGTGA

Peptide Sequence

PEP ID

Os11t0528300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:19172896:19174910:1 gene:Os11g0528300 transcript:Os11t0528300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF339 family protein. (Os11t0528300-01)
Sequence

MAAALLRRALHLHLHLRRALPSPPRAGALLLPAAASSPAHRFLSGFTTTTQQNSASTTTI
DLSSDESRRRLINRLVYRSKQRGFLELDLVLGTWVEQHIHSMDEANIRALLQVLDLENPD
LWKWLTSQEQPPEAVNSNPVFIAVKSKVTDNLSKHSSPETRSAPGQPWVRGWDDKRGIEG
PKYGNQ

Transcript Sequence

Transcript ID

Os11t0528300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:19172896:19174910:1 gene:Os11g0528300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF339 family protein. (Os11t0528300-01)
Sequence

ACACGTCTCCCACCACCTCCGCGATCCCCTCTCCTCTCACCTCGCCTCCCATGGCGGCCG
CGCTCCTCCGCCGCGCGCTCCACCTCCACCTCCACCTCCGCCGCGCGCTCCCCTCCCCTC
CCCGCGCCGGCGCGCTCCTCCTCCCCGCCGCCGCTTCCTCCCCCGCCCACCGCTTCCTCT
CCGGCTTCACCACCACCACCCAGCAGAACAGCGCCTCCACCACCACCATCGACCTCTCCT
CCGACGAGAGCCGCCGCCGCCTCATCAACAGGCTGGTGTACAGGAGCAAGCAGCGGGGGT
TCTTGGAGCTGGACCTGGTGCTCGGGACCTGGGTCGAGCAGCACATCCACTCCATGGACG
AGGCCAACATCCGCGCCCTGCTCCAAGTCCTCGACCTCGAAAACCCAGATTTGTGGAAGT
GGCTTACTAGTCAGGAACAACCACCCGAGGCAGTGAACTCTAATCCTGTATTTATCGCTG
TTAAATCGAAGGTCACGGACAACCTGAGCAAGCACTCTTCTCCTGAGACCAGATCAGCAC
CTGGTCAGCCATGGGTGAGAGGGTGGGATGACAAGCGAGGCATTGAAGGACCAAAGTATG
GAAATCAGTGATGAGATATGCTTCAGAGAATGGTAGCGGTTTTATGCCTAAGTATAATCC
TGTTTTGTTGCCCCTATAGTTTGGTGCTTGTGTAGAATAAATTAAATCATGGTATCCAAT
GATTTGGAAATTTGGAGTGTCACCATGAATTTGGATTGACAAATAATGCTCTGTACAAGT
TTCAAACACTTTCTGGTTGAAGACAAAGCAGTGTGGTGGTAACAACTTAACATGT