Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0526200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:19092888:19095132:1 gene:Os11g0526200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0526200-01)
Sequence

GCCACCGCCGCCGCGACCCGCCTCCTCCTCCCGCCTCTCCGCGCGCCGCCGCCGTCGCTC
GCCGGCGGCGCGGCGGCGGCGGCCGGTGGTGGGGGCCGGTGGCGCGGTGCCGTGCCGAGA
CGGGCGAGGGCCCGCCGCGCCGTCGTCCCGCCCCGCGCGTCGCTCGTCGACAGCAGCGGC
GGCGCGGCCGCCGCCGCCGTGCTCCTGGACGCGGCGGTGGCCGGGGCGACGGGGTACTCG
CAGGCGAGCTACTACACGTCGCTGGGGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTCG
CTCATCAAGCGCTCCGTCAAGTCCAAGGTTGTGCAGAAGACATTCGTCAAGGAGGAAGGG
CAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAAC
TTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGCACTATGGTGCCGAGCAGG
GGGCAAGCAGCACTTCTTACCTTCTGCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGTT
CTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTCTGGCTTATGACCTTAAGCCCA
TTGGCGGGTGTATACTACTGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAATG
ATTTTATCGGATGACGGGAATGTATCCGAAATTCTTGTGCGGGGTGATGATGTCCAAGTG
GAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGATC
TTTGAAACATGA

Peptide Sequence

PEP ID

Os11t0526200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:19092888:19095132:1 gene:Os11g0526200 transcript:Os11t0526200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0526200-01)
Sequence

ATAAATRLLLPPLRAPPPSLAGGAAAAAGGGGRWRGAVPRRARARRAVVPPRASLVDSSG
GAAAAAVLLDAAVAGATGYSQASYYTSLGLFVLSVPGLWSLIKRSVKSKVVQKTFVKEEG
QTMAPNQVAGEILSFFTRNNFTISDRGEVITFEGTMVPSRGQAALLTFCTCISLGSVGLV
LSIAVPEGGNNWFWLMTLSPLAGVYYWTKASRKEEIKVKMILSDDGNVSEILVRGDDVQV
EQMRKELKFSEKGMIYVKGIFET

Transcript Sequence

Transcript ID

Os11t0526200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:19092888:19095132:1 gene:Os11g0526200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os11t0526200-01)
Sequence

AGCCACCGCCGCCGCGACCCGCCTCCTCCTCCCGCCTCTCCGCGCGCCGCCGCCGTCGCT
CGCCGGCGGCGCGGCGGCGGCGGCCGGTGGTGGGGGCCGGTGGCGCGGTGCCGTGCCGAG
ACGGGCGAGGGCCCGCCGCGCCGTCGTCCCGCCCCGCGCGTCGCTCGTCGACAGCAGCGG
CGGCGCGGCCGCCGCCGCCGTGCTCCTGGACGCGGCGGTGGCCGGGGCGACGGGGTACTC
GCAGGCGAGCTACTACACGTCGCTGGGGCTCTTCGTGCTCTCCGTCCCTGGCCTCTGGTC
GCTCATCAAGCGCTCCGTCAAGTCCAAGGTTGTGCAGAAGACATTCGTCAAGGAGGAAGG
GCAGACGATGGCGCCGAACCAGGTGGCTGGGGAGATCCTCTCGTTCTTCACCCGTAACAA
CTTCACCATCTCTGACCGTGGCGAGGTTATCACTTTTGAGGGCACTATGGTGCCGAGCAG
GGGGCAAGCAGCACTTCTTACCTTCTGCACCTGCATTAGCCTTGGCAGCGTCGGTCTTGT
TCTATCAATTGCAGTCCCGGAGGGTGGCAACAACTGGTTCTGGCTTATGACCTTAAGCCC
ATTGGCGGGTGTATACTACTGGACAAAGGCATCAAGAAAAGAAGAGATCAAGGTCAAAAT
GATTTTATCGGATGACGGGAATGTATCCGAAATTCTTGTGCGGGGTGATGATGTCCAAGT
GGAGCAGATGAGGAAGGAGCTCAAGTTCAGTGAGAAGGGGATGATATATGTTAAGGGGAT
CTTTGAAACATGATTGAATAGCTTGTTATCTACAGAACAGAGCTAACAAAAGAGTTCAAA
AGAGCAGTTCCCTTGGT