Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0525600-04
CDS Infomation	cds chromosome:IRGSP-1.0:11:19061732:19067600:1 gene:Os11g0525600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-mannosidase. (Os11t0525600-01);Similar to Alpha-mannosidase. (Os11t0525600-02);Similar to predicted protein. (Os11t0525600-03);Similar to predicted protein. (Os11t0525600-04);Similar to predicted protein. (Os11t0525600-05)
Sequence	GAATTCTTTAAAGGGAGAAGCAACTCTGATCTCACAACAGATAGTTTAGCTGATGCTCTA GCTCTTGCTCAGCACCATGATGCTGTTACAGGAACGGAGAAGCAACATGTCGCAAATGAC TATGCAAAGAGATTATCAATTGGCTATACACAAGCCGAGAAGCTGGTTTCATCCTCTCTC TCTTGCTTGAGCCAGTCAGGCTCAAAATCACATTGTCCGTCCCAAACAACGAATTTTGAA CAGTGTCCGCTCCTAAATATTACATATTGCCCCCCTTCCGAGATGGACCTTTCTCAAGGG AAAAGTTTGGTTGTGCTTGTGTACAACTCTCTTGGGTGGAAACGGGAGGATGTCCTTCGC ATACCGGTCATCAGTGACTCAATTGTTGTTCATGATTCTGAGGGAAGAGAAGTTGAATCA CAACTTCTGCCTATAGCTAATGCATCTTTGTACATGCGGGAGAAACATGTCAAGGCTTAC CTAGGCATGTTACCAGCTGCAAAACCCAAGTTTTGGCTTGCTTTTCCAGTTTCTGTACCA CCTCTTGGTTTCAATACGTACTTTATATCAAGCGGGAAGAAATCAGCATCAGTCTCTTTG ATGTCCACTCTGCACTCATCTCAAGGAAGTGAAAATAGTAACATGCAAATTGGGCAAGGA CAGTTGAAACTTCAATACAATGCAGCTGGAGCATTATCTCTGTACTCCAATAGTAAGACC CAGGTTGAAGCAAATTTTGAGCAGAAGTACAAGTATTACATAGGACAGGATGGAAATGGA AGTGATCCTCAGGCTTCTGGAGCATACATATTTCGCCCTAATGGCACAGTTCCTATCAAG ACTGATGGACAGGTTCCTCTGACAGTTCTCCGTGGGTCCATATTGGACGAAGTGCATCAG CAGATTAATCCATGGATATATCAGATCAACAGAGTTTACAAAGGAAAGGACTATGTGGAG ACTGAATTTATAGTTGGACCAATACCAGTGGATGATGGAAATGGAAAAGAACTATCCACT GAAGTCGTTACAAACATGGCAACAAACAAAACATTTTACACTGATTCCAGTGGACGTGAC TTCATCAAAAGGATACGGGATTACCGGTCAGAGTGGAAGATCGAAGTGCACCAGCCTATC GCTGGAAACTATTATCCTGTTAATCTTGGCATTTATGTGGAAGATGGAAGCAGAGAGTTA TCTATACTTGTAGACAGGTCTGTTGGAGGTGCCAGCATAAAGGATGGACAGATAGAGCTA ATGCTACACAGGAGACTACTTCATGATGATGGTCGTGGTGTTGCAGAGGCATTAAATGAA ACAACCTGTTTTGATAATCAATGTGAAGGACTAGTTATTCAAGGAAAGTATTATCTCAAA ATTGATCCACAAGGTGAAGGAGCTAGGTGGCGGCGGACATTTGGCCAGGAAATATACTCC CCTCTTCTTATTGCTTTTGCAGAGCAGGATGGAGGTAATTGGGTGAATTCACACGTTACA AAATTCTCTGCAATGGATCCGGCCTACAGCTTGCCTGATAATGTTGCATTGCTTACTCTT CAGGAACTTGAAGACGGAACTGTTCTTCTTCGGTTGGCTCACCTATACGAGGCTGGAGAG CACAAGGATCTTTCAGCTCTAGCTAGCGTCGACCTGAAGAGAGTATTTCCAGACAAGAAG ATTGTCAAGATTGTTGAGACAAGCCTATCAGCGAACCAAGAACGTTCAGCCATGGAGAAA AAGAGGCTGAAGTGGAAGGTGGAAGGCCCTCCTGCTGATGAAAAGATCGTCCGGGGAGGC CCCGTAGATCCTTCCAAGCTCGTCGTTGATCTGGGCCCCATGGAGATACGCACATTCCTC ATCAATTTCGCCCCGCAGTCCGGCAAACAGTTGATGTGA

Peptide Sequence

PEP ID	Os11t0525600-04
PEP Infomation	pep chromosome:IRGSP-1.0:11:19061732:19067600:1 gene:Os11g0525600 transcript:Os11t0525600-04 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-mannosidase. (Os11t0525600-01);Similar to Alpha-mannosidase. (Os11t0525600-02);Similar to predicted protein. (Os11t0525600-03);Similar to predicted protein. (Os11t0525600-04);Similar to predicted protein. (Os11t0525600-05)
Sequence	EFFKGRSNSDLTTDSLADALALAQHHDAVTGTEKQHVANDYAKRLSIGYTQAEKLVSSSL SCLSQSGSKSHCPSQTTNFEQCPLLNITYCPPSEMDLSQGKSLVVLVYNSLGWKREDVLR IPVISDSIVVHDSEGREVESQLLPIANASLYMREKHVKAYLGMLPAAKPKFWLAFPVSVP PLGFNTYFISSGKKSASVSLMSTLHSSQGSENSNMQIGQGQLKLQYNAAGALSLYSNSKT QVEANFEQKYKYYIGQDGNGSDPQASGAYIFRPNGTVPIKTDGQVPLTVLRGSILDEVHQ QINPWIYQINRVYKGKDYVETEFIVGPIPVDDGNGKELSTEVVTNMATNKTFYTDSSGRD FIKRIRDYRSEWKIEVHQPIAGNYYPVNLGIYVEDGSRELSILVDRSVGGASIKDGQIEL MLHRRLLHDDGRGVAEALNETTCFDNQCEGLVIQGKYYLKIDPQGEGARWRRTFGQEIYS PLLIAFAEQDGGNWVNSHVTKFSAMDPAYSLPDNVALLTLQELEDGTVLLRLAHLYEAGE HKDLSALASVDLKRVFPDKKIVKIVETSLSANQERSAMEKKRLKWKVEGPPADEKIVRGG PVDPSKLVVDLGPMEIRTFLINFAPQSGKQLM

Transcript Sequence

Transcript ID	Os11t0525600-04
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:19061732:19067600:1 gene:Os11g0525600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-mannosidase. (Os11t0525600-01);Similar to Alpha-mannosidase. (Os11t0525600-02);Similar to predicted protein. (Os11t0525600-03);Similar to predicted protein. (Os11t0525600-04);Similar to predicted protein. (Os11t0525600-05)
Sequence	GAATTCTTTAAAGGGAGAAGCAACTCTGATCTCACAACAGATAGTTTAGCTGATGCTCTA GCTCTTGCTCAGCACCATGATGCTGTTACAGGAACGGAGAAGCAACATGTCGCAAATGAC TATGCAAAGAGATTATCAATTGGCTATACACAAGCCGAGAAGCTGGTTTCATCCTCTCTC TCTTGCTTGAGCCAGTCAGGCTCAAAATCACATTGTCCGTCCCAAACAACGAATTTTGAA CAGTGTCCGCTCCTAAATATTACATATTGCCCCCCTTCCGAGATGGACCTTTCTCAAGGG AAAAGTTTGGTTGTGCTTGTGTACAACTCTCTTGGGTGGAAACGGGAGGATGTCCTTCGC ATACCGGTCATCAGTGACTCAATTGTTGTTCATGATTCTGAGGGAAGAGAAGTTGAATCA CAACTTCTGCCTATAGCTAATGCATCTTTGTACATGCGGGAGAAACATGTCAAGGCTTAC CTAGGCATGTTACCAGCTGCAAAACCCAAGTTTTGGCTTGCTTTTCCAGTTTCTGTACCA CCTCTTGGTTTCAATACGTACTTTATATCAAGCGGGAAGAAATCAGCATCAGTCTCTTTG ATGTCCACTCTGCACTCATCTCAAGGAAGTGAAAATAGTAACATGCAAATTGGGCAAGGA CAGTTGAAACTTCAATACAATGCAGCTGGAGCATTATCTCTGTACTCCAATAGTAAGACC CAGGTTGAAGCAAATTTTGAGCAGAAGTACAAGTATTACATAGGACAGGATGGAAATGGA AGTGATCCTCAGGCTTCTGGAGCATACATATTTCGCCCTAATGGCACAGTTCCTATCAAG ACTGATGGACAGGTTCCTCTGACAGTTCTCCGTGGGTCCATATTGGACGAAGTGCATCAG CAGATTAATCCATGGATATATCAGATCAACAGAGTTTACAAAGGAAAGGACTATGTGGAG ACTGAATTTATAGTTGGACCAATACCAGTGGATGATGGAAATGGAAAAGAACTATCCACT GAAGTCGTTACAAACATGGCAACAAACAAAACATTTTACACTGATTCCAGTGGACGTGAC TTCATCAAAAGGATACGGGATTACCGGTCAGAGTGGAAGATCGAAGTGCACCAGCCTATC GCTGGAAACTATTATCCTGTTAATCTTGGCATTTATGTGGAAGATGGAAGCAGAGAGTTA TCTATACTTGTAGACAGGTCTGTTGGAGGTGCCAGCATAAAGGATGGACAGATAGAGCTA ATGCTACACAGGAGACTACTTCATGATGATGGTCGTGGTGTTGCAGAGGCATTAAATGAA ACAACCTGTTTTGATAATCAATGTGAAGGACTAGTTATTCAAGGAAAGTATTATCTCAAA ATTGATCCACAAGGTGAAGGAGCTAGGTGGCGGCGGACATTTGGCCAGGAAATATACTCC CCTCTTCTTATTGCTTTTGCAGAGCAGGATGGAGGTAATTGGGTGAATTCACACGTTACA AAATTCTCTGCAATGGATCCGGCCTACAGCTTGCCTGATAATGTTGCATTGCTTACTCTT CAGGAACTTGAAGACGGAACTGTTCTTCTTCGGTTGGCTCACCTATACGAGGCTGGAGAG CACAAGGATCTTTCAGCTCTAGCTAGCGTCGACCTGAAGAGAGTATTTCCAGACAAGAAG ATTGTCAAGATTGTTGAGACAAGCCTATCAGCGAACCAAGAACGTTCAGCCATGGAGAAA AAGAGGCTGAAGTGGAAGGTGGAAGGCCCTCCTGCTGATGAAAAGATCGTCCGGGGAGGC CCCGTAGATCCTTCCAAGCTCGTCGTTGATCTGGGCCCCATGGAGATACGCACATTCCTC ATCAATTTCGCCCCGCAGTCCGGCAAACAGTTGATGTGAGGGGTGACATGGCCTTGGCAC CAATGTTTTATTTTTAGCTTGAGTTCTTCTCATGGTGATGAGCAATAAGAAATAATGTGG CCATGGTGATTGGTGACCGAATGCAGAGATGCACTGGTAGCATCCAACCACTGAGCCCTG TTTGTAGCTTGTAAATGAATTTGGCTTCACCTTAAGTTGAGCTCGGTTTCAGTGAAGATA AGTGACTGAAACTTTTGGTCTCC