Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0524300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:18981895:18987914:1 gene:Os11g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1001 family protein. (Os11t0524300-01)
Sequence

ATGGGCTCCGGCGAGGACACCGGCGCGGGCGTCGCGGGAGGAGGGGGAGGCGGAGGCGCC
GGTGGGGTGGTGCGGGGCGCGGTGCTGAAGGCGCTCGTGGTCGTCGGCGGCGTGCTGCTG
CTCCGGCGGCTGCGCCGCTCCACCACCCGGTGGGACCACGCCCGCGCCGTCGTGGACGCG
CTCTCCGGTGAGAAGTTCTCGAGGGAGCAGGCGAGGAAGGATCCTGATAACTACTTTAAT
TTGAGGATGCTTACATGCCCTGCAACAGAGATGGTGGATGGTTCTAGAGTGCTTTACTTT
GAGCAAGCATTTTGGAGAAGTCCAGAAAAACCTTTCCGACAAAGATTCTACATGGTAAAG
CCATGCCCAAAGGATATGAAATGTGATGTTGAGTTGAGTTCATATGCAATTAGAGATGTT
GAAGAGTACAAGAATTTCTGTGACCGTCCAAAGGATCAGAGGCCACAACCAGAAGAAGTC
ATTGCGGACATTGCAGAGCACCTGACTACCATACACTTGTCGCGGTGTGAGCGTGGAAAG
CGCTGCTTGTACAAAGGATCAACCCCTCCTGAAGGCTTTCCCAACAGCTGGAGCGGTGCG
ACATATTGTACATCGGATTTGTCCATTCACAAGAATGGTGAGGTGCATATCTGGGACAAG
GGTTTTGACGATGATGGGAATCAGGTTTGGGGAACCAAAGCTGGCCCTTACGAGTTCAAG
CCTGCCCCCAAGTCGAATTACGACGACATGTTCTCGCCGTTGAATTTTTCTGCTCCATTG
ACGCTGGAGAAGAAGATTGAGAGCTCGTTCGCAATCGATGATCAGTAG

Peptide Sequence

PEP ID

Os11t0524300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:18981895:18987914:1 gene:Os11g0524300 transcript:Os11t0524300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1001 family protein. (Os11t0524300-01)
Sequence

MGSGEDTGAGVAGGGGGGGAGGVVRGAVLKALVVVGGVLLLRRLRRSTTRWDHARAVVDA
LSGEKFSREQARKDPDNYFNLRMLTCPATEMVDGSRVLYFEQAFWRSPEKPFRQRFYMVK
PCPKDMKCDVELSSYAIRDVEEYKNFCDRPKDQRPQPEEVIADIAEHLTTIHLSRCERGK
RCLYKGSTPPEGFPNSWSGATYCTSDLSIHKNGEVHIWDKGFDDDGNQVWGTKAGPYEFK
PAPKSNYDDMFSPLNFSAPLTLEKKIESSFAIDDQ

Transcript Sequence

Transcript ID

Os11t0524300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:18981895:18987914:1 gene:Os11g0524300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1001 family protein. (Os11t0524300-01)
Sequence

ATTTCCCTCCCTCTCCCCCTCTTCCGCCCCAACCTCCAACCTCACCTCGTCGTCGCCACG
GCCTCCCTCGCGAGTTCGCCGTGGAACACCCGATGGGCTCCGGCGAGGACACCGGCGCGG
GCGTCGCGGGAGGAGGGGGAGGCGGAGGCGCCGGTGGGGTGGTGCGGGGCGCGGTGCTGA
AGGCGCTCGTGGTCGTCGGCGGCGTGCTGCTGCTCCGGCGGCTGCGCCGCTCCACCACCC
GGTGGGACCACGCCCGCGCCGTCGTGGACGCGCTCTCCGGTGAGAAGTTCTCGAGGGAGC
AGGCGAGGAAGGATCCTGATAACTACTTTAATTTGAGGATGCTTACATGCCCTGCAACAG
AGATGGTGGATGGTTCTAGAGTGCTTTACTTTGAGCAAGCATTTTGGAGAAGTCCAGAAA
AACCTTTCCGACAAAGATTCTACATGGTAAAGCCATGCCCAAAGGATATGAAATGTGATG
TTGAGTTGAGTTCATATGCAATTAGAGATGTTGAAGAGTACAAGAATTTCTGTGACCGTC
CAAAGGATCAGAGGCCACAACCAGAAGAAGTCATTGCGGACATTGCAGAGCACCTGACTA
CCATACACTTGTCGCGGTGTGAGCGTGGAAAGCGCTGCTTGTACAAAGGATCAACCCCTC
CTGAAGGCTTTCCCAACAGCTGGAGCGGTGCGACATATTGTACATCGGATTTGTCCATTC
ACAAGAATGGTGAGGTGCATATCTGGGACAAGGGTTTTGACGATGATGGGAATCAGGTTT
GGGGAACCAAAGCTGGCCCTTACGAGTTCAAGCCTGCCCCCAAGTCGAATTACGACGACA
TGTTCTCGCCGTTGAATTTTTCTGCTCCATTGACGCTGGAGAAGAAGATTGAGAGCTCGT
TCGCAATCGATGATCAGTAGTATATTAGTATGTACATACAGTTCATGTACCTCTCTCTCT
TTTTTTTTAATTTAAGAAAACTAAGCAGAAAAAACTGCCTTCGTTTAGTATATAGCCCCG
TGTACTGAATTTTGTTGCTAAGAAATGCAATAAAAAGTAGCGTTGCATGT