Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0523700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:18922046:18925254:1 gene:Os11g0523700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 002, Inducer of CBF expression 1 description:Similar to Transcription factor ICE1 (Inducer of CBF expression 1) (Basic helix- loop-helix protein 116) (bHLH116) (AtbHLH116). (Os11t0523700-01)
Sequence	ATGCTGCCGCGGTTTCACGGCGCCATGTGGATGCAGGACGACGGCGGCGGCGACCAAGAA CACGGGCAGGCGGCGCCGCCTGGGCAGGAGCAGCACCACCACGACCAGCATCTCATGGCG TTGGCGGCCGCGGCCGCGGGCGGCGCCGGGTTCGGCGCGGCGCAGGCGCCGGCGCCGCTG CTCGATGAGGACTGGTACTTCGACGCGGCGGGTGGTGGTGGTGGTGGCGCGCATGGGTCC ATGATGCTGGGTTTGTCGTCCGTCCATGGCGGGATTGGGGCGGGGACGTCTGGTGGTGGG CATGGGCAGCAGTTCTCGCTGCTCAACATGGGCGCCGCGGCCGCGCCGTTCGACGTCTCC GGGTTCGACCTCGGGATCGCCTGCGGCGGCGTTGGCGGCGGCGGCGACGTGGTGTCGTTT CTTGGCGGCGGGAACGCGTCGAACACCGCGCTGCTCCCCGTCGGGAACGCGGGGTTCCTC GGCACGTTCGGCGGGTTCGGCACCGCGGCGTCCCAAATGCCGGAGTTCGGCGGGCTCGCC GGGTTCGACATGTTCGACGCGGGCGCCGTGAACACCGGGGGCAGCTCCTCCTCCTCGTCG GCGGCGGCGGCGGCGGCGTCCGCCTCGGCGCACGTGAGCAACACCGCGCCGTTCTCCGGG CGCGGCAAGGCGGCGGTGCTGCGGCCGCTGGATATCGTCCCGCCCGTGGGCGCGCAGCCG ACGCTGTTCCAGAAGCGCGCGCTCCGCCGCAACGCCGGCGAGGACGACGACGACAAGAAG CGCAAGGCCGCCGCGGGCGCGGGCGCGGGCGCGCTGTCCGCCGACGGCGCCGACATGGTG CTCGACGACGGCGACGACGACGGCCTCAGCATCGACGCGTCGGGCGGCCTCAACTACGAC TCCGAGGACGCCAGGGGCGGCGAGGACAGCGGCGCCAAGAAGGAGTCGAACGCCAACAGC ACGGTCACCGGCGACGGGAAGGGGAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCG GAGCGCCGCCGCCGGAAGAAGCTCAACGACCGCCTCTACATGCTCCGCTCCGTCGTGCCC AAGATCAGCAAGATGGACAGGGCTTCCATTCTCGGCGACGCGATTGAGTACCTGAAGGAG CTGCTGCAGAAGATCAATGATCTTCAGAATGAGCTCGAGTCGTCCCCCGCGACGTCGTCA TTGCCTCCAACACCCACAAGCTTCCATCCCCTGACACCGACGCTGCCCACATTGCCGTCC CGCATCAAGGAAGAGATCTGCCCAAGTGCATTGCCAAGCCCCACTGGACAACAGCCAAGG GTTGAGGTTAGGCTGAGGGAAGGCCGGGCTGTCAATATCCACATGTTCTGTGCTCGGAGG CCCGGTCTACTGCTCTCTGCCATGAGGGCCGTCGAAGGCCTTGGTCTCGATGTCCAGCAA GCTGTAATCAGTTGCTTCAATGGCTTTACGTTGGATATTTTTAAGGCTGAGCAATGCAAG GACGGCCCTGGGCTGTTGCCTGAAGAAATCAAGGCCGTTCTGATGCAATCCGCCGGGTTC CATACCATGATCTAG

Peptide Sequence

PEP ID	Os11t0523700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:18922046:18925254:1 gene:Os11g0523700 transcript:Os11t0523700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 002, Inducer of CBF expression 1 description:Similar to Transcription factor ICE1 (Inducer of CBF expression 1) (Basic helix- loop-helix protein 116) (bHLH116) (AtbHLH116). (Os11t0523700-01)
Sequence	MLPRFHGAMWMQDDGGGDQEHGQAAPPGQEQHHHDQHLMALAAAAAGGAGFGAAQAPAPL LDEDWYFDAAGGGGGGAHGSMMLGLSSVHGGIGAGTSGGGHGQQFSLLNMGAAAAPFDVS GFDLGIACGGVGGGGDVVSFLGGGNASNTALLPVGNAGFLGTFGGFGTAASQMPEFGGLA GFDMFDAGAVNTGGSSSSSSAAAAAASASAHVSNTAPFSGRGKAAVLRPLDIVPPVGAQP TLFQKRALRRNAGEDDDDKKRKAAAGAGAGALSADGADMVLDDGDDDGLSIDASGGLNYD SEDARGGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVP KISKMDRASILGDAIEYLKELLQKINDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPS RIKEEICPSALPSPTGQQPRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQ AVISCFNGFTLDIFKAEQCKDGPGLLPEEIKAVLMQSAGFHTMI

Transcript Sequence

Transcript ID	Os11t0523700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:18922046:18925254:1 gene:Os11g0523700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 002, Inducer of CBF expression 1 description:Similar to Transcription factor ICE1 (Inducer of CBF expression 1) (Basic helix- loop-helix protein 116) (bHLH116) (AtbHLH116). (Os11t0523700-01)
Sequence	GCACCTCTGCATCTCTGCCATCTCCTTCCCCACCCCACCGCCATTGCCGCCGCGGCGATG CTGCCGCGGTTTCACGGCGCCATGTGGATGCAGGACGACGGCGGCGGCGACCAAGAACAC GGGCAGGCGGCGCCGCCTGGGCAGGAGCAGCACCACCACGACCAGCATCTCATGGCGTTG GCGGCCGCGGCCGCGGGCGGCGCCGGGTTCGGCGCGGCGCAGGCGCCGGCGCCGCTGCTC GATGAGGACTGGTACTTCGACGCGGCGGGTGGTGGTGGTGGTGGCGCGCATGGGTCCATG ATGCTGGGTTTGTCGTCCGTCCATGGCGGGATTGGGGCGGGGACGTCTGGTGGTGGGCAT GGGCAGCAGTTCTCGCTGCTCAACATGGGCGCCGCGGCCGCGCCGTTCGACGTCTCCGGG TTCGACCTCGGGATCGCCTGCGGCGGCGTTGGCGGCGGCGGCGACGTGGTGTCGTTTCTT GGCGGCGGGAACGCGTCGAACACCGCGCTGCTCCCCGTCGGGAACGCGGGGTTCCTCGGC ACGTTCGGCGGGTTCGGCACCGCGGCGTCCCAAATGCCGGAGTTCGGCGGGCTCGCCGGG TTCGACATGTTCGACGCGGGCGCCGTGAACACCGGGGGCAGCTCCTCCTCCTCGTCGGCG GCGGCGGCGGCGGCGTCCGCCTCGGCGCACGTGAGCAACACCGCGCCGTTCTCCGGGCGC GGCAAGGCGGCGGTGCTGCGGCCGCTGGATATCGTCCCGCCCGTGGGCGCGCAGCCGACG CTGTTCCAGAAGCGCGCGCTCCGCCGCAACGCCGGCGAGGACGACGACGACAAGAAGCGC AAGGCCGCCGCGGGCGCGGGCGCGGGCGCGCTGTCCGCCGACGGCGCCGACATGGTGCTC GACGACGGCGACGACGACGGCCTCAGCATCGACGCGTCGGGCGGCCTCAACTACGACTCC GAGGACGCCAGGGGCGGCGAGGACAGCGGCGCCAAGAAGGAGTCGAACGCCAACAGCACG GTCACCGGCGACGGGAAGGGGAAGAAGAAGGGGATGCCGGCCAAGAACCTCATGGCGGAG CGCCGCCGCCGGAAGAAGCTCAACGACCGCCTCTACATGCTCCGCTCCGTCGTGCCCAAG ATCAGCAAGATGGACAGGGCTTCCATTCTCGGCGACGCGATTGAGTACCTGAAGGAGCTG CTGCAGAAGATCAATGATCTTCAGAATGAGCTCGAGTCGTCCCCCGCGACGTCGTCATTG CCTCCAACACCCACAAGCTTCCATCCCCTGACACCGACGCTGCCCACATTGCCGTCCCGC ATCAAGGAAGAGATCTGCCCAAGTGCATTGCCAAGCCCCACTGGACAACAGCCAAGGGTT GAGGTTAGGCTGAGGGAAGGCCGGGCTGTCAATATCCACATGTTCTGTGCTCGGAGGCCC GGTCTACTGCTCTCTGCCATGAGGGCCGTCGAAGGCCTTGGTCTCGATGTCCAGCAAGCT GTAATCAGTTGCTTCAATGGCTTTACGTTGGATATTTTTAAGGCTGAGCAATGCAAGGAC GGCCCTGGGCTGTTGCCTGAAGAAATCAAGGCCGTTCTGATGCAATCCGCCGGGTTCCAT ACCATGATCTAGGACAGGAGAGCTCAATCAAACTCCAAAGGACAGAGTAGCTCAGGAATT GACAAAGTACCGGTGTTTCCTGGTCATGTGGCATTTTCGACAGAAGGAAGTTCCTCTTTT TAGTAGTTTTAGACCTGCTCAGGGCTTGCTGAACCAGTTTATCTTCTAGTATTTAGAGTC CCCAAAAAAAATAATGTCAGTAGTCTCTTGGTGCTTTAACATTGTGTTTTGAAACCTTCT GCCTGTTTTTTTTACTTCCCGGTACATGTTTTCGTCTTGTGTAAGTCTGAAGATGAATTC CTATCAATTAACAGGCAAAGAAACAGGATCATTCCAAGAAC