Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0521000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:18770070:18772676:1 gene:Os11g0521000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 111 description:Lipase, GDSL domain containing protein. (Os11t0521000-01)
Sequence	ATGGCGGCGGCGGCAGCAACGGCGTTGGCCGCCGTGATACTGCTGCTGGTGCTGGCGACG ACGGCGGAGGCGGCGTGCTCGGTGAGCGCGATCTACAGCTTCGGCGACTCCATCGCCGAC ACCGGCAACCTCCTCCGGGAGGGCCCCGCCGTCGGCGCCTTCGCCTCCATCGGCACCTAC CCCTACGGCCAGACCCTCCGCCGCCCCACCGGCCGCTGCTCCGACGGCCTCCTCATCATC GACTACTTCGCCATGGCGCTGAACCTGTCGCTGGTGAGCCCGTACCTGGAGAAGGGGGCG AGGTTCGAGAGCGGGGTGAACTTCGCGGTGGCCGGGGCGACGGCGCTGGACCGGAGCTAC CTGCTGCAGAGCGGCGTGGTGATGCCGCCGGCGAGCGTGCCGCTCAGCTCGCAGCTCGAC TGGTTCAGGTCACACCTCAACTCAACCTGTTCTTCACACCAAGACTGCGCGAAAAAGCTG TCCGGAGCTCTGTTCTTGGTTGGGGAGATAGGAGGGAACGACTACAACTACGCCTTCTTC CAGGGGAGATCCATCGAATCCATGAAGACCTACGTGCCACAAGTTGTGAGAAGCATAATG GACGTTGCAAAGGAGGTGATCGAGCTAGGAGCGACCAAGATCGTCATCCCGGGCAACTTC CCGATCGGGTGCTCGCCGAGTTACCTCTCCCTCTTCTCCACGGCGATCTCCGGCGACTAC GACGACCGGGGCTGCCTCAAGAGTTACAACTCCTTCGCCATGTACCACAATGATCAGCTC CGGGCCGCCATAGATGACCTCCGGAAGGTCAACTCGGATGTCGCCATCGTCTACGCAGAC TACTATGGCGCCTTCATGCATCTCCTCCAAAAGGCTGACCTCTTAGGGTTCGAGGAGGAC TCATTGTTCAAGGCATGTTGCGGCGCAGGCGGAAAGTACAACTTTGACATGAACCTAATG TGTGGCGCAGTGGGAACGAACGTTTGTGCAGACCCAGCGCAGCACATTAGCTGGGATGGC ATCCACCTCACTCAACAGGCGTACAAGGCTATGGCTTTGTCCCTTATTATGGAAGGGTTT GCTCAACCAGCTGACATTGTGCAAAAAATCTGGAGTTGCTAG

Peptide Sequence

PEP ID	Os11t0521000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:18770070:18772676:1 gene:Os11g0521000 transcript:Os11t0521000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 111 description:Lipase, GDSL domain containing protein. (Os11t0521000-01)
Sequence	MAAAAATALAAVILLLVLATTAEAACSVSAIYSFGDSIADTGNLLREGPAVGAFASIGTY PYGQTLRRPTGRCSDGLLIIDYFAMALNLSLVSPYLEKGARFESGVNFAVAGATALDRSY LLQSGVVMPPASVPLSSQLDWFRSHLNSTCSSHQDCAKKLSGALFLVGEIGGNDYNYAFF QGRSIESMKTYVPQVVRSIMDVAKEVIELGATKIVIPGNFPIGCSPSYLSLFSTAISGDY DDRGCLKSYNSFAMYHNDQLRAAIDDLRKVNSDVAIVYADYYGAFMHLLQKADLLGFEED SLFKACCGAGGKYNFDMNLMCGAVGTNVCADPAQHISWDGIHLTQQAYKAMALSLIMEGF AQPADIVQKIWSC

Transcript Sequence

Transcript ID	Os11t0521000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:18770070:18772676:1 gene:Os11g0521000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDSL ESTERASE/LIPASE PROTEIN 111 description:Lipase, GDSL domain containing protein. (Os11t0521000-01)
Sequence	GAAACCATCTCAATTATAACTAAACCCAACAAGCTGTGCCTAGCTCCAACAGCTCAGCTC AGCTAAGCTAGTTGCTAGCAGTGGCCGGTGCGTGATCGGCCATGGCGGCGGCGGCAGCAA CGGCGTTGGCCGCCGTGATACTGCTGCTGGTGCTGGCGACGACGGCGGAGGCGGCGTGCT CGGTGAGCGCGATCTACAGCTTCGGCGACTCCATCGCCGACACCGGCAACCTCCTCCGGG AGGGCCCCGCCGTCGGCGCCTTCGCCTCCATCGGCACCTACCCCTACGGCCAGACCCTCC GCCGCCCCACCGGCCGCTGCTCCGACGGCCTCCTCATCATCGACTACTTCGCCATGGCGC TGAACCTGTCGCTGGTGAGCCCGTACCTGGAGAAGGGGGCGAGGTTCGAGAGCGGGGTGA ACTTCGCGGTGGCCGGGGCGACGGCGCTGGACCGGAGCTACCTGCTGCAGAGCGGCGTGG TGATGCCGCCGGCGAGCGTGCCGCTCAGCTCGCAGCTCGACTGGTTCAGGTCACACCTCA ACTCAACCTGTTCTTCACACCAAGACTGCGCGAAAAAGCTGTCCGGAGCTCTGTTCTTGG TTGGGGAGATAGGAGGGAACGACTACAACTACGCCTTCTTCCAGGGGAGATCCATCGAAT CCATGAAGACCTACGTGCCACAAGTTGTGAGAAGCATAATGGACGTTGCAAAGGAGGTGA TCGAGCTAGGAGCGACCAAGATCGTCATCCCGGGCAACTTCCCGATCGGGTGCTCGCCGA GTTACCTCTCCCTCTTCTCCACGGCGATCTCCGGCGACTACGACGACCGGGGCTGCCTCA AGAGTTACAACTCCTTCGCCATGTACCACAATGATCAGCTCCGGGCCGCCATAGATGACC TCCGGAAGGTCAACTCGGATGTCGCCATCGTCTACGCAGACTACTATGGCGCCTTCATGC ATCTCCTCCAAAAGGCTGACCTCTTAGGGTTCGAGGAGGACTCATTGTTCAAGGCATGTT GCGGCGCAGGCGGAAAGTACAACTTTGACATGAACCTAATGTGTGGCGCAGTGGGAACGA ACGTTTGTGCAGACCCAGCGCAGCACATTAGCTGGGATGGCATCCACCTCACTCAACAGG CGTACAAGGCTATGGCTTTGTCCCTTATTATGGAAGGGTTTGCTCAACCAGCTGACATTG TGCAAAAAATCTGGAGTTGCTAGGAGCTTGAGCATGTATATTGTTGAATGTTATAAGCAT TGAATTCGTATGAGCCAACAGTTATACAACGGTAACTATACAAGTATATAG