Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0516100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:18509086:18512628:1 gene:Os11g0516100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L31 domain containing protein. (Os11t0516100-01)
Sequence

GTTGTAAGGATGAAGAAGGGACTGCATCCTCAGATGCAGTGGATTTCATATGTGACACAA
AGCGGCAGGTTGATCAATATCATGATGACCAAGGTCAACCATACTGGCAAAGTGTATCAT
ATGAGAGCAAAGCGTCAAATGGCTCAAAGCCTGGGCCAGATTGCAAAGTTCAACCGCCGA
TACCAGCAGGAATCTGAGGAAAACAAAGAAAAGTAG

Peptide Sequence

PEP ID

Os11t0516100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:18509086:18512628:1 gene:Os11g0516100 transcript:Os11t0516100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L31 domain containing protein. (Os11t0516100-01)
Sequence

VVRMKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRR
YQQESEENKEK

Transcript Sequence

Transcript ID

Os11t0516100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:18509086:18512628:1 gene:Os11g0516100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L31 domain containing protein. (Os11t0516100-01)
Sequence

GTTTTCCAGCCGCCTCCCCCCGCTTCGCCTCCCCTCCCCTCCCCTCCTCTCGCGCGCCGC
CGCCGGCGAGCACGTCACCGGAGGCACGGCGCAGACGAGCTCCTCTCCTCTCCTCTCCTC
TCCTCTCCTCCCCGATTCCTCCCTGCTCCCGCCCCCCGCCCTCCGTCTCGGTTCTATTCG
AATCGAATCGAAGGTAAACTCATCCTCCCCTCTCTCTCCCTCTTCCTCCCATATGAGCAG
ATGTGGGAGATTCATCAGGACATGGATTTGGATTGGTTTTTTTTTAGTACTGAAACCCCC
ATTTACCCCCAGCACCACCACGTGACGCCCCCTAGTTCAGATGTGTCGCCGTTTGCGCCT
AAGATGGCAGTGGCAGAGTGCAGCAAAGAGTTGAGAGATGTTAGTTCGCCATATCGTCAA
TTAGGATGCTCCACGGAGCTCTCGTCTTGATGTTAGTACAAATTTAGTCGAAAGCCATTC
TAATGTGGCGGTGCCCCTGGGCTATTTATTGGGAGCAAGGGGGATTTGCTCCATTTTGTT
ACCTCTGTACGGTGTCTTTACCAGGAATTTTTAGCCGAAAGGAATCCCGCGCCGCCGATT
TTAAGCGCTTTGAATAGATTTTTGGTTATAGCCTCGAATCGCTAGTAATATTCCCTGCGC
ATCTTCGACTTATGATTCATCACCTGCGGAAACATGTGTAGGTCTGATTTTGTGTTGCAA
GAGAGTGTGGAAAGGTAGGTCGGCTAATTCAGTTTGTTTCAGCCGTCCTGTGTATTATAT
TGTGGTGGTTGGTTTTATTCGGACCTGATTTCCAATGACTACCCTGGTTAATATGGTTAT
GCTGTATAGCAGTATTTTACTACCTATGTGTATTCTTAACACTTCAGAATGAATAAAATC
AATCTATGAATGTGTAAGCCAAAACTTAAATTCTACACTACAGCTGTATAGCTGTAGTAG
CAACTGTGGTATTGCTAAAGAAGTCTGTATGTTGGATCGGAAAATGTGAAACCAGAATAA
TACAGTCCAGTAGTCCATATGTTTTCTTTCTGCCTTTTCTTATAAGGAGTAAGGTTATCA
GCCAGATTGTAAGTTTATTTCTGTGAACATGGAACTTGAATAGGCATATGATCTTTCACA
GGATTGGGAATTTAGGATATACCCTAATGAACTACAACCTCTAAGCAGCACTGCCTTCTT
GTGTGACTAATTAAGCAACTATTAGTTTGATTCTTACTTTCATATGATTTATCTTAAATG
GCCATGACTGTTCAATATGTGTCTTACCAGGAATTAGTAGGCAGGGATTCATATGACTGC
CTCATTTGTTTTTTTGTTACCTTTGTTTGCTGTTCAATATGTGTCTTACCAGGAATTAGT
AGGCAGGGATTCATATGACTGCCTCATATGTTTTTTTGTTACCTTTGTTTGCTGTTCAAT
ATGTGTCTTACCAGGAATTAGTAGGCAGGGATTCCATTCAGATTTTGAGTGCTTTGAATA
GACTGGTGATTAGCTTCAATTCTCTAGTAAGATTCCCTGAGCATGCGCAACTTATGGTTC
GTCACCCATGGAACCATGTGTAGGCCGATTTTTGTCTTGGCGAAAGTGTACAAGTTTCCT
AGGTAGGACAGCTAATTGAATCTGTTTCAGTCGTTCCTATCAATTGTATCATGGTGGTTT
TTTTTTTACCTTGAATCCTTGTTCTTATTTCAAATAACCGTGCGTTGCTTATATAGTTAT
TTTGTACAGTTACTATTTTACTACCTATGGTTTGTGCTGACATCGGAATGAACAAAATCA
ATATATGAATGGGTAAGTCAAAACATAGAAATCCTACACGGCACTTGCTTGATGGGGTAT
TACCAAAGAATTCTGTTTATGAAAACAGAATACAGTCCAGTTGTCCATATTTTGCTGCTT
TTGCTTATAAAGAGCAAGGTTGCCAGCCAGATTTTCCCTGCGAATTCGGAAATTGAATAG
AAGTAGAATCTTTCACAGGATTGGGAATTTAGGATGTACTCCCATATAATTTAATCATTT
TAACTTCCGTACCTGTGGAAGCATGAAGATCGGTACTCTGACTATTGTGTCATCTTTTAT
TTCTTATGAAGAACTACCTATCTCTAATAATGCAACAGGAATGTGGAAGAGTTCTAGATG
GAACCATTATACATGGGTAACAGGGGATTAATAGGCATCACTCTTCGTCTGTTTTCTGTA
GTTCATATATACCTTCACTTTGCGCTGCATATTAGGCTCTACTCATGGTCTTAGGAATGG
TATTTCCGAGCATATTTTGTTACATGGTTCAACAATCTCACTTAATAAGTTCAATGGACG
AATTTGAATATACATGATGATGGAGATTTGTTTTCTAATGGAGTACATCTGAATGTGATC
TTTGACTTTTGTTGTCTTTTCGTGTGACTAATAATCAACTACTACTTCGATCCCTACTTT
CATATTATTTATCTTAAATGGTCATTTGACTGTCTTTTTCTTCTTCATATTATACCATCC
TACCTTCTTTTGTATGATTGGGTGGTTCTCGCATGTTTTGCTTAACATTGGAGAACTTAT
GCTCATTTATGACTGGGTGGTACATTTATGCTCATGCAACATTTGTGTGGCAGAACTTGT
TCAGCATCACTCCTTAATTGGCTTGACATCCACCGTAATGTGAACATTCATTATGATGAT
ATCAAAGGTCATGCATTTGTTACCTTTTTTTTTTTTTTGCTTTTTTCCGAGGATTCTTCT
TATTACTGACCATTATCTCCTAATCTAGTTGTTATGTAGTGTATTTTTAGGAACTGGATA
TTTCTTCCATGGTTAATGTCCAGAACCATGATAATAGATATTTACTAGTTACATTTCTTT
TCGTGTATAGTGTAAGAAGAATTGTTCAGCATAAAAACTTGTAGCCTTTTCTGACATCCT
TGCATTTTTTTAATTCCTTTTGAATAGGTTGTAAGGATGAAGAAGGGACTGCATCCTCAG
ATGCAGTGGATTTCATATGTGACACAAAGCGGCAGGTTGATCAATATCATGATGACCAAG
GTCAACCATACTGGCAAAGTGTATCATATGAGAGCAAAGCGTCAAATGGCTCAAAGCCTG
GGCCAGATTGCAAAGTTCAACCGCCGATACCAGCAGGAATCTGAGGAAAACAAAGAAAAG
TAGGCTGCTGTCAGCAAGGAGCTACATATGCTCTAAGGCAGATTAGTGTGGTGCTATGTT
TATCGTCCAGGAACATTGCTCATGGATCTTTGTTTTGGATGTCATCCTCTTCCATGTAGC
CATCTGATCATTGTGGTTTATCCCTGTAGTTTCAGTTCTACCATTCACGAATTTTTCTGG
AGCTATTTTTGTTGCTCAATTCTGCCCGATATCTCTAGAGAATACAGCATGCTACTTTAT
GTTTTGTTGATTTTAGATTGAAGCTCCCTGAATTCCTGTAAGATGGCATCGTTTGGCTTG
TCATGCTACGTCTCTTTTAGCTTATATAAATTATGTTTATTGTTAGTACATAATATTTCT
ATT