Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0515500-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:18485308:18490843:-1 gene:Os11g0515500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0720 description:Similar to transport inhibitor response 1 protein. (Os11t0515500-01)
Sequence	ATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTAGCGTCGCACCGC GACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAGCGCCTCAGCCGC CGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTGCACGCGCGCTTC CCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCCGCGGGGTGGGGT GCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGCCTCGAGGAGCTC CGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCTTGCTCATTCCCC AATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGATGGGCTTGCTACT GTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGTCTGGTGGAGGAT CGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTAGAATCCTTGAAT TTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTGGTTGCAAGGAGT CCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTTTTGGCCAGAATT CTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTACGAGGCAATATT GTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTGCTGAAGAGTTTA TCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCTGTTTGCAAGAAT CTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTATCTTATTGAATTT ATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATTGGTGATGAAGGA TTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTATTTCCTGCGAAT GCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATATCTGCAGGCTGT AACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCTGCACTGATTACT GTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTTGATCCAGGATCA GCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATCGTACAGTCATGC AAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTGTTCCTCTACATT GGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGAGATACCGACGAT GGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAAATCAGGGACAGT CCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCAATGCGCTCACTC TGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCAGCAAGCATGGCA AACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCAGACAATGCTAAT GATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGACCGAGGGGTGAT GCGCCTGAATTCATCTCAACGTTCTAA

Peptide Sequence

PEP ID	Os11t0515500-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:18485308:18490843:-1 gene:Os11g0515500 transcript:Os11t0515500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0720 description:Similar to transport inhibitor response 1 protein. (Os11t0515500-01)
Sequence	MVFFPEEVVEHILGFLASHRDRNAVSLVCREWYRVERLSRRSVLVRNCYAARPERVHARF PGLRSLSVKGRPRFVPAGWGAAARPWVAACVAACPGLEELRLKRMVVTDGCLKLLACSFP NLKSLVLVGCQGFSTDGLATVATNCRFMKELDLQESLVEDRDSRWLGCFPKPSTLLESLN FSCLTGEVNSPALEILVARSPNLRSLRLNRSVPLDVLARILCRRPRLVDLCTGSFVRGNI VGAYAGLFNSFQHCSLLKSLSGFWDATSLFIPVIAPVCKNLTCLNLSSAPMVRSAYLIEF ICQCKKLQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVAISAGC NKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSC KGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDS PFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNAN DAKKVKKLYIYRTVAGPRGDAPEFISTF

Transcript Sequence

Transcript ID	Os11t0515500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:18485308:18490843:-1 gene:Os11g0515500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Os_F0720 description:Similar to transport inhibitor response 1 protein. (Os11t0515500-01)
Sequence	GAAGAAAAACCCTCACCTCCACTCCCCCCTCGCCGGAGCCACGGCGACCCTCTCCACCCC CTGCCTTGCCGCCGGCGAGTGTCCTTGCGTGCGCCGCCGGTGAGCGGGTGTGGATCCCAG CGGCGGCGCGATCGGCCTTCGAATCGAACTGAAAGCTGAACCCTCGTTGCCACTGCTGTG AACATGTCCCAAATTGAGAAGATCGTATGAGCTATGGGGAATTATTAGGATTCTTGGAGG CGGCGGCGGCATATGGTGTTCTTCCCGGAGGAGGTGGTGGAGCACATCCTTGGGTTTCTA GCGTCGCACCGCGACCGCAACGCGGTGTCGCTGGTGTGCCGGGAGTGGTACCGCGTCGAG CGCCTCAGCCGCCGCTCGGTGCTCGTGCGCAACTGCTACGCGGCGCGCCCGGAGCGCGTG CACGCGCGCTTCCCCGGCCTGCGCTCGCTGAGCGTGAAGGGGAGGCCGCGCTTTGTCCCC GCGGGGTGGGGTGCCGCGGCGCGGCCATGGGTGGCCGCGTGCGTCGCCGCGTGCCCTGGC CTCGAGGAGCTCCGGCTGAAGCGGATGGTTGTCACTGATGGGTGCCTCAAGCTGCTCGCT TGCTCATTCCCCAATTTGAAGTCGCTCGTCCTTGTTGGCTGTCAGGGGTTCAGCACTGAT GGGCTTGCTACTGTCGCTACCAATTGCAGATTTATGAAGGAACTGGACTTACAAGAGAGT CTGGTGGAGGATCGAGACTCTCGTTGGCTTGGATGTTTTCCCAAGCCTTCTACATTACTA GAATCCTTGAATTTTTCTTGCTTGACCGGGGAGGTGAATAGTCCTGCATTGGAAATACTG GTTGCAAGGAGTCCAAATCTTAGAAGCTTGAGATTGAACCGTTCAGTTCCACTTGATGTT TTGGCCAGAATTCTTTGTCGCAGACCTAGGCTGGTGGATTTATGTACAGGATCTTTTGTA CGAGGCAATATTGTTGGTGCATATGCTGGGCTATTCAATAGTTTTCAACATTGCAGTTTG CTGAAGAGTTTATCTGGGTTTTGGGATGCTACAAGCTTGTTTATTCCAGTGATTGCTCCT GTTTGCAAGAATCTAACGTGCTTGAACCTTAGCTCTGCTCCAATGGTCAGGAGTGCTTAT CTTATTGAATTTATTTGTCAATGCAAGAAACTCCAACAATTGTGGGTGTTAGATCACATT GGTGATGAAGGATTGAAAATTGTAGCCTCATCCTGTATACAGCTCCAAGAGTTGAGAGTA TTTCCTGCGAATGCAAATGCCAGAGCAAGCACTGTGACAGAGGAAGGGCTAGTTGCCATA TCTGCAGGCTGTAACAAGTTACAGTCTGTGCTCTATTTTTGCCAACGGATGACAAACTCT GCACTGATTACTGTCGCAAAGAACTGCCCACGATTCACGTCCTTCAGACTGTGTGTTCTT GATCCAGGATCAGCAGACGCTGTGACAGGGCAGCCATTGGATGAGGGTTATGGGGCAATC GTACAGTCATGCAAAGGCCTTAGACGGCTATGTTTGTCTGGACTTCTCACAGACACAGTG TTCCTCTACATTGGCATGTATGCTGAGAGGCTGGAGATGCTTTCTGTAGCATTTGCAGGA GATACCGACGATGGCATGACCTACGTGCTCAATGGCTGCAAAAATCTCAAGAAGCTGGAA ATCAGGGACAGTCCTTTTGGTGACAGCGCGCTTCTTGCAGGCATGCATCAGTACGAGGCA ATGCGCTCACTCTGGTTGTCGTCGTGTAATGTCACCCTGGGGGGTTGCAAGTCTCTTGCA GCAAGCATGGCAAACCTCAACATCGAGGTCATGAATAGAGCAGCAAGTATCAATGAGGCA GACAATGCTAATGATGCAAAGAAGGTGAAGAAGTTGTATATTTACAGGACAGTTGCTGGA CCGAGGGGTGATGCGCCTGAATTCATCTCAACGTTCTAAATCCATATATTTTTGAAGTTG AAGGTTTGTTCTTCGACAACCACCTTTTGTTTATATCATACTCTGCTACGTCGAGTTGAT CTACATGTTCTAAAGATCTATCTATCTTCACGGTCGAAGGGATCTTCTAGGATTATTTTG TGTAAATTCCTTTGCTATCACCTCTGCTATGTCATTATCTTCCAGCAGTGCTACACTTAT GATTAATCTCCAAAATTGAAACTCTATAGTTATGGTTAACTTGGCAGATTGATTACACAT CATGGTAACATCTAAGCCTTGTAATACCATAATTCTAGCAAGTCATATGCGTGGTTCATC TTCATGTATATACGATTTCATATCGATGCTCTCATGTAATGTCTGGGAAATTTGAAGTGC CAAATTGTTACTTTTCTGAGTCGAAAGATATGATCAGTTAAGCCTGATGAACAGCTGATT CAGTAGTTGGACCCTCCAATTTGTTGCAGCATTTCAGCACTGGTCAAGACTAATCTGTGA TTTACAAGTTGAGAATTTGAGTAGATCCCCATCCTGTTTACCTTCAAATACTCTGAAATT TTTCTTTCTGATGTCGCAATCCAATGTCCATGTCGCTGCAAGACAGGGTGGCTTGGAAGT CAGTCATCTCGCTGTCAGTTGTAGCGTGGGGGTGTACTGGTGTTGCTCACAGTTTGATAT CATCATCATGGCCATCACACAACATGCTTATTCCTGCACGGTTTAGCAAGCTTTAATTGA CCACCATCATCGCTTGCTGTTTGATCATTAGTACTACATCAATTGGAGTCCAAATTCCAA AATGTTTGGTTATAATTGCTTCGAGGCAATTAAGATGTTTATGAGGGTAAATTAAGGACT TGTTTAGTTGGGGAAAATTTTTATATTTGATTGTCACATTGGATATACGGACACACATTT GAAGTATTAAATGTAATCTAATAACACAGTAAATTATAGATTCCGCCTGTAAACTGCTTG GTGAATTTATTGAGCCTAATTAATCCGTTATTAGTAAATGTTTACTGC