Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0514800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:18448294:18451677:-1 gene:Os11g0514800 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRO1 domain domain containing protein. (Os11t0514800-01)
Sequence

ATGGGGTGTGGTGCATCAATCCCTAAGAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGC
CGGAGCGTCATACAGGAGGTTGCCATATTCGTGCCGACAATTCGCATTCCGGTGGACAGT
GATGTTGCCCATCCACTCAGAGGACTAGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAG
TTCAGAGACCGCGTTGTCGCGCTCTCTGAAGATATCTATTGCGCGGATGTTTCGGATGTT
TCAGAGTTACAGCATGCCCTTGAGGAGTACTTGCCAGTTGTTCTTGGTTTAACAATGAAA
GAAAGCCGTCTTGAATCATCGGTGGAATTCAGATGGAGGACCTTGGATGATGACGAAGAG
TGTTGTCTTTCAAGTGCATGGTATGAAGTTCTGTCAGTCATCCACATGATGGCGATGCTT
GCATTGTTTGAAGCCAACCTGATACTTATTCCGAAGAACGGTCAAGTTGGAGGTGAAAGG
AAGGTATCAGAAGATGCAAAGAAGGATGTCGTCGATTCGTTGCTCAGAGCATCAGGATGT
TTAGATTACTGCGTGCACCGTATACTTGTACAGATGCCGGCACAAGTCAAGAAAAGTTTT
CCTAGTTATTTTCAGGAAGGTATGCTTGAGGCCATTTCAATTCAAGCATTGGCTCAGTGT
GTAGAAATACAACTTGGATTGGCTTCAGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGG
AGGCTAGCCTGTGAGCTAGTCAGTTATTTCTCACAGGCTCACTATTGCTTATCGGGATGC
GACACGAGCGACTCGTTTGGGAAGAAGCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAA
GCCAAGGCAGTAGCATACTACTACCATGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGC
AGCCACATCAGTGCAGTGTGCTGCCTCTCTGCAGCTGATGATCTAGTTGCAGATAGCAAG
AGGGCTTGTTTGAGCTTCTGCTTGGCAAACCCCATCACAAGGGTACCTCCTCCTTGGGGT
ATCATGAGGAATATGCACAAGAAAATCCCAGATTCTGCGTGCAAGAGATTCCAAATGTAT
GGATATCTTTTTGAACAAGACAATAACAGTGCACTTCAATCCTTACCAGATCTACCAGAA
TTTGCGCTGTCGCTGAGACCCGAAGGGTATGAACTGCCTAGCACTGATTCAATCTGGGAT
AATGTTGATAGCCAGCCTCAGATTCAGAGCCTCAAGGAGCATCTGGATGATGAAGACGAA
GTGGAAACAAAATGA

Peptide Sequence

PEP ID

Os11t0514800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:18448294:18451677:-1 gene:Os11g0514800 transcript:Os11t0514800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRO1 domain domain containing protein. (Os11t0514800-01)
Sequence

MGCGASIPKKCKVGGKGKKRRSVIQEVAIFVPTIRIPVDSDVAHPLRGLVSKELVDRLSK
FRDRVVALSEDIYCADVSDVSELQHALEEYLPVVLGLTMKESRLESSVEFRWRTLDDDEE
CCLSSAWYEVLSVIHMMAMLALFEANLILIPKNGQVGGERKVSEDAKKDVVDSLLRASGC
LDYCVHRILVQMPAQVKKSFPSYFQEGMLEAISIQALAQCVEIQLGLASECEKATLSVKR
RLACELVSYFSQAHYCLSGCDTSDSFGKKLLLFLKWKCMEAKAVAYYYHGLVLDKGNEAS
SHISAVCCLSAADDLVADSKRACLSFCLANPITRVPPPWGIMRNMHKKIPDSACKRFQMY
GYLFEQDNNSALQSLPDLPEFALSLRPEGYELPSTDSIWDNVDSQPQIQSLKEHLDDEDE
VETK

Transcript Sequence

Transcript ID

Os11t0514800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:18448294:18451677:-1 gene:Os11g0514800 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRO1 domain domain containing protein. (Os11t0514800-01)
Sequence

GATGTGCAGGGTCAAAACAAACACACACACACACATCTGTCTCTTCTTCAGGTTTCAGGT
CTCCTGGCTGCTTTGCTTCTGCTGCCTCTGTGTGGGGCTCCAGCCTTGCTCAGATTGATG
ATTGGTGATCCAACCATCTTCATCACTTACAGAGATGGGGTGTGGTGCATCAATCCCTAA
GAAATGCAAGGTAGGAGGGAAGGGGAAGAAGCGCCGGAGCGTCATACAGGAGGTTGCCAT
ATTCGTGCCGACAATTCGCATTCCGGTGGACAGTGATGTTGCCCATCCACTCAGAGGACT
AGTATCCAAGGAGCTCGTCGACCGCCTCTCAAAGTTCAGAGACCGCGTTGTCGCGCTCTC
TGAAGATATCTATTGCGCGGATGTTTCGGATGTTTCAGAGTTACAGCATGCCCTTGAGGA
GTACTTGCCAGTTGTTCTTGGTTTAACAATGAAAGAAAGCCGTCTTGAATCATCGGTGGA
ATTCAGATGGAGGACCTTGGATGATGACGAAGAGTGTTGTCTTTCAAGTGCATGGTATGA
AGTTCTGTCAGTCATCCACATGATGGCGATGCTTGCATTGTTTGAAGCCAACCTGATACT
TATTCCGAAGAACGGTCAAGTTGGAGGTGAAAGGAAGGTATCAGAAGATGCAAAGAAGGA
TGTCGTCGATTCGTTGCTCAGAGCATCAGGATGTTTAGATTACTGCGTGCACCGTATACT
TGTACAGATGCCGGCACAAGTCAAGAAAAGTTTTCCTAGTTATTTTCAGGAAGGTATGCT
TGAGGCCATTTCAATTCAAGCATTGGCTCAGTGTGTAGAAATACAACTTGGATTGGCTTC
AGAGTGTGAGAAGGCAACTCTGTCAGTAAAGAGGAGGCTAGCCTGTGAGCTAGTCAGTTA
TTTCTCACAGGCTCACTATTGCTTATCGGGATGCGACACGAGCGACTCGTTTGGGAAGAA
GCTCCTGCTGTTTCTGAAGTGGAAATGCATGGAAGCCAAGGCAGTAGCATACTACTACCA
TGGCCTTGTGCTTGACAAAGGCAATGAAGCCAGCAGCCACATCAGTGCAGTGTGCTGCCT
CTCTGCAGCTGATGATCTAGTTGCAGATAGCAAGAGGGCTTGTTTGAGCTTCTGCTTGGC
AAACCCCATCACAAGGGTACCTCCTCCTTGGGGTATCATGAGGAATATGCACAAGAAAAT
CCCAGATTCTGCGTGCAAGAGATTCCAAATGTATGGATATCTTTTTGAACAAGACAATAA
CAGTGCACTTCAATCCTTACCAGATCTACCAGAATTTGCGCTGTCGCTGAGACCCGAAGG
GTATGAACTGCCTAGCACTGATTCAATCTGGGATAATGTTGATAGCCAGCCTCAGATTCA
GAGCCTCAAGGAGCATCTGGATGATGAAGACGAAGTGGAAACAAAATGATACTTCAGACA
TCCAAAACGCTTCATTTCATTGTGCCATGAAAAGTAGCATTAGTACTAGCAAAGACATCG
GAATGCTCAATTCAGAAGTGTTTGGATTCAGCATATGGCATTGAGCCAAAAAGAAATCAG
AATATGTACCTTCTGTGTAGTTGAAAGTATCTATCACTGATTATAAACAGAATCAACAAT
AATAGGAAAGAAGGGTGTTTCTTATTTTTC