Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0514500-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:18430464:18432555:-1 gene:Os11g0514500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorghum bicolor leucine-rich repeat-containing extracellular glycoprotein precursor. (Os11t0514500-01)
Sequence	ATGGGGGCTCATTCTTCAGCAGCAGCAGCAGCTCTGTTCACTGGCTTTCTTGCCTTGGCT ACACTTGTGAGCTGCAACACTGAAGGTGACATTCTGTACGCGCAAAGGCTGGCATGGAAG GACCCCTTCAATGTGCTGCAGAGTTGGGATCCAACCCTTGTAAATCCCTGCACCTGGTTC CATGTCACCTGCAACAATAACAACTCCGTCGTCCGCGTGGATTTGGGGTTAGCAGGTCTA TCAGGTCCTCTGATTCCACAGCTGGGAGGACTGAGTTACCTTCAGTACCTTGAACTGTAT GGGAATGAGCTGAATGGATCAATACCAGCAGCACTGGGCAACCTGAGCAGTCTTGTCAGC CTTGATCTCCAGGGCAACCTGCTCACTGGCGCGATACCGGATTCGCTAGGCGCCATTAGC ACCCTGCGAAATCTGAGGTTGTATGGGAACAACCTGACTGGCACCATACCACAATCTTTG GGCAGCCTGACGAGCCTTGTCAAATTGGAGCTTCAGAAGAATTCATTGAGTGGCACCATC CCTGCTTCTCTCGGCAACATCAAGACATTGGAGTTGTTGCGACTGAACAAAAATTCACTT ACCGGCACAGTGCCAATGGAAGTCCTCTCCCTTGTCCTTGTCGGCAACTTGACTGAGCTA AATGTTGCTGGAAACAATTTGGACGGCACTGTCGGATCAACTGGGTGGAGAGTGACTACC ATCATTCAGGACAATCTGAAGACCTCAGGCTGA

Peptide Sequence

PEP ID	Os11t0514500-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:18430464:18432555:-1 gene:Os11g0514500 transcript:Os11t0514500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorghum bicolor leucine-rich repeat-containing extracellular glycoprotein precursor. (Os11t0514500-01)
Sequence	MGAHSSAAAAALFTGFLALATLVSCNTEGDILYAQRLAWKDPFNVLQSWDPTLVNPCTWF HVTCNNNNSVVRVDLGLAGLSGPLIPQLGGLSYLQYLELYGNELNGSIPAALGNLSSLVS LDLQGNLLTGAIPDSLGAISTLRNLRLYGNNLTGTIPQSLGSLTSLVKLELQKNSLSGTI PASLGNIKTLELLRLNKNSLTGTVPMEVLSLVLVGNLTELNVAGNNLDGTVGSTGWRVTT IIQDNLKTSG

Transcript Sequence

Transcript ID	Os11t0514500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:18430464:18432555:-1 gene:Os11g0514500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sorghum bicolor leucine-rich repeat-containing extracellular glycoprotein precursor. (Os11t0514500-01)
Sequence	GTGCCAACTGCCAAGGAACTACTCAGGTTTTTCAGTAATGGGGGCTCATTCTTCAGCAGC AGCAGCAGCTCTGTTCACTGGCTTTCTTGCCTTGGCTACACTTGTGAGCTGCAACACTGA AGGTGACATTCTGTACGCGCAAAGGCTGGCATGGAAGGACCCCTTCAATGTGCTGCAGAG TTGGGATCCAACCCTTGTAAATCCCTGCACCTGGTTCCATGTCACCTGCAACAATAACAA CTCCGTCGTCCGCGTGGATTTGGGGTTAGCAGGTCTATCAGGTCCTCTGATTCCACAGCT GGGAGGACTGAGTTACCTTCAGTACCTTGAACTGTATGGGAATGAGCTGAATGGATCAAT ACCAGCAGCACTGGGCAACCTGAGCAGTCTTGTCAGCCTTGATCTCCAGGGCAACCTGCT CACTGGCGCGATACCGGATTCGCTAGGCGCCATTAGCACCCTGCGAAATCTGAGGTTGTA TGGGAACAACCTGACTGGCACCATACCACAATCTTTGGGCAGCCTGACGAGCCTTGTCAA ATTGGAGCTTCAGAAGAATTCATTGAGTGGCACCATCCCTGCTTCTCTCGGCAACATCAA GACATTGGAGTTGTTGCGACTGAACAAAAATTCACTTACCGGCACAGTGCCAATGGAAGT CCTCTCCCTTGTCCTTGTCGGCAACTTGACTGAGCTAAATGTTGCTGGAAACAATTTGGA CGGCACTGTCGGATCAACTGGGTGGAGAGTGACTACCATCATTCAGGACAATCTGAAGAC CTCAGGCTGAGGCAAATATCAGGAGTCAGGATTTGTTTTACCACACACCTTGGGAGATGG GAGTTGGGAAACAATTATTTGATGCTTCATTCTAGACATATAGTAGTGTATTTTTTATTT GAATAAAATTTGTTCTGCCCCTTTGTGGCAACTCCCATTTATGGAGATGAGATGTGTGTA TATATTTCTGAAAATAAAGATGAGCTTGGCATC