Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0514400-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:18426136:18428231:-1 gene:Os11g0514400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os11t0514400-00)
Sequence

ATGGGGGCTCATTCTGCAGCGGCAGCTCTGTTCACTGCCCTTCTTGCTTTTGCTACACTT
GTGAGCTGCAACACTGAAGGTGACATTCTGTACGCGCAAAGGCAGGAATTGAAGGACATC
AACAATGTGCTGGCGAGCTGGGATCCGACCCTTGTCAATCCCTGCACTTGGGTCCACGTC
ACCTGCGACAATAGCAACTCTGTCATCCGTGTGGATTTGGGATCGGCAGGTCTATCAGGC
TCTCTGATTCCACAGCTGGGAGGACTGAGTAACCTTCAGTACTTAAACTTGCATGGCAAC
AACCTGACTGGCACCATACCACAATCCTTCGGCAACCTGACGAACCTTGTCAGGTTGGAG
CTTCAGAAGAATTCACTGAGTGGCACCATCCCTGCTTCTCTTGGCAACATCAAAACATTG
AAGTTCTTGCGGCTGAACGGGAATTCTCTGACGGGGACGCTGCCGTTGGAAGTCCTCTCC
CTTGTCCTTGTCGGGAATTTGACTGAGATAAATGTTGCTAGAAACAATCTGGACGGCACT
GTCGGATCAACTGGACTGAGAGTGACTGCAATTATCCAGGACAGACTGAAGATCTCAGGC
TGA

Peptide Sequence

PEP ID

Os11t0514400-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:18426136:18428231:-1 gene:Os11g0514400 transcript:Os11t0514400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os11t0514400-00)
Sequence

MGAHSAAAALFTALLAFATLVSCNTEGDILYAQRQELKDINNVLASWDPTLVNPCTWVHV
TCDNSNSVIRVDLGSAGLSGSLIPQLGGLSNLQYLNLHGNNLTGTIPQSFGNLTNLVRLE
LQKNSLSGTIPASLGNIKTLKFLRLNGNSLTGTLPLEVLSLVLVGNLTEINVARNNLDGT
VGSTGLRVTAIIQDRLKISG

Transcript Sequence

Transcript ID

Os11t0514400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:18426136:18428231:-1 gene:Os11g0514400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1. (Os11t0514400-00)
Sequence

CATTTCATTGTGCCAAGAACTACTCAGGTCTTGCAGCAATGGGGGCTCATTCTGCAGCGG
CAGCTCTGTTCACTGCCCTTCTTGCTTTTGCTACACTTGTGAGCTGCAACACTGAAGGTG
ACATTCTGTACGCGCAAAGGCAGGAATTGAAGGACATCAACAATGTGCTGGCGAGCTGGG
ATCCGACCCTTGTCAATCCCTGCACTTGGGTCCACGTCACCTGCGACAATAGCAACTCTG
TCATCCGTGTGGATTTGGGATCGGCAGGTCTATCAGGCTCTCTGATTCCACAGCTGGGAG
GACTGAGTAACCTTCAGTACTTAAACTTGCATGGCAACAACCTGACTGGCACCATACCAC
AATCCTTCGGCAACCTGACGAACCTTGTCAGGTTGGAGCTTCAGAAGAATTCACTGAGTG
GCACCATCCCTGCTTCTCTTGGCAACATCAAAACATTGAAGTTCTTGCGGCTGAACGGGA
ATTCTCTGACGGGGACGCTGCCGTTGGAAGTCCTCTCCCTTGTCCTTGTCGGGAATTTGA
CTGAGATAAATGTTGCTAGAAACAATCTGGACGGCACTGTCGGATCAACTGGACTGAGAG
TGACTGCAATTATCCAGGACAGACTGAAGATCTCAGGCTGAGGCCAAGATCGGGACTTAT
TTTCTCACGCATGCTGGAAAATGGGAGTGGAAAATAGATGATTTTAATGTATTACGCTAG
ACAT