Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0507200-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:18093188:18095604:1 gene:Os11g0507200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transferase. (Os11t0507200-00)
Sequence	GTTGTTGAGGTTAGGGAGAACGGCGCCGTCGTGGAGGTGGCCGACGGCGGCAAGGCGGCG GCGGCGGCGAAGCTGACGGTGAAGCGCGGCGAGCCGGAGCTGGTGGCGCCGGCGGAGGCG ACGCCGACGGGGGAGAAGTACTACCTGTCCAACCTGGACCAGAACATCGCCGTGATCGTG CAGACGGTGTACTGCTACAAGCCACCGGCGGCGAGCGGCGGCGACAATGGCGACGCGGTG GCCGTGCTCCGCGACGCGCTGGCGAAGGTGCTCGTCCACTACCACCCGCTGGCGGGGCGG CTGACGATCAGCGCGGAGATGAAGCTCGCCGTGGAGCTCACCGGCGAGGGCGCCGTGTTC GTCGCCGCCGACGCCGGGTACGACCTCGCCGACGTCGGCGACCTCACCAAGCCCGACCCC GCCGCGCTCGGCCACCTCGTCTACTCCATCCCCGGCGCCAAGAACATCCTCGAGATGCCC CCCATGACGGCGCAGGTGACACGGTTCAAGTGCGGCGGCTTCGCGCTGGGGCTCGCCATG AACCACTGCATGTTCGACGGGCTGGGCGCCATGGAGTTCGTCAACTCGTGGGCGGAGACG GCGCGCGGCGCCGCCGAGCTCACCGTGCCGCCGTTCCTGGACCGCACGTTGCTCCGCGCG CGCGACCCCCCGGTGATCTCCTTTGAGCACCACGAGTTCGAGGAGATCCCCGACGTCTCC GACACGGCGGCGCTCTACGCCGACCAGGACCTCCTCTACCGCTCCTTCTGCTTCGACCCG GACCGCCTCGAGCGCGTCCGCGCGCTCGCCCTCGCCGGCGCCGGCGCCGAGAACGGCGAC GACCTCGTCGGCGGGCGGTGCACCACCTTCGAGGCGCTGTCGGGGCTCGTCTGGCGCGCG CGCACCCGCGCCCTGGGCCTCGCGCCGGAGCAGCGGACGAAGCTGCTGTTCGCCGTGGAC GGGCGGCGCCGCTTCGAGCCGCCGCTCCCCCGCGGCTACTTCGGCAACGGCATCGTGCTG ACGAACGCGGTGGCGACCGCCGGCGAGCTGCTGTCGTCGCCGCCGTCGCGCGCGGCGGGG CTGGTGCAGGCGGCGGTGCGGATGGTGACCGACGGGTACATGCGGTCGGCGGTGGACTAC TTCGAGGCGACGCGGGCGCGGCCGTCGCTGGCGTCGACGCTGCTGATCACGACGTGGTCC AGGCTCGCCTTCCACGGCGCCGACTTCGGCTGGGGCGCGCCGGCGATGTCCGGCCCCGTC ACGCTGCCGGAGAAGGAGGTCATCCTCTTCCTCGCGCACGGCGAGGAGAGGAAGAGCATC AACGTCCTCCTCGGCCTCCCGGCGTCCGCCATGGACGCCTTCCAAGAGCTCATGGACGAG ATATGA

Peptide Sequence

PEP ID	Os11t0507200-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:18093188:18095604:1 gene:Os11g0507200 transcript:Os11t0507200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transferase. (Os11t0507200-00)
Sequence	VVEVRENGAVVEVADGGKAAAAAKLTVKRGEPELVAPAEATPTGEKYYLSNLDQNIAVIV QTVYCYKPPAASGGDNGDAVAVLRDALAKVLVHYHPLAGRLTISAEMKLAVELTGEGAVF VAADAGYDLADVGDLTKPDPAALGHLVYSIPGAKNILEMPPMTAQVTRFKCGGFALGLAM NHCMFDGLGAMEFVNSWAETARGAAELTVPPFLDRTLLRARDPPVISFEHHEFEEIPDVS DTAALYADQDLLYRSFCFDPDRLERVRALALAGAGAENGDDLVGGRCTTFEALSGLVWRA RTRALGLAPEQRTKLLFAVDGRRRFEPPLPRGYFGNGIVLTNAVATAGELLSSPPSRAAG LVQAAVRMVTDGYMRSAVDYFEATRARPSLASTLLITTWSRLAFHGADFGWGAPAMSGPV TLPEKEVILFLAHGEERKSINVLLGLPASAMDAFQELMDEI

Transcript Sequence

Transcript ID	Os11t0507200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:18093188:18095604:1 gene:Os11g0507200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transferase. (Os11t0507200-00)
Sequence	GGTTGTTGAGGTTAGGGAGAACGGCGCCGTCGTGGAGGTGGCCGACGGCGGCAAGGCGGC GGCGGCGGCGAAGCTGACGGTGAAGCGCGGCGAGCCGGAGCTGGTGGCGCCGGCGGAGGC GACGCCGACGGGGGAGAAGTACTACCTGTCCAACCTGGACCAGAACATCGCCGTGATCGT GCAGACGGTGTACTGCTACAAGCCACCGGCGGCGAGCGGCGGCGACAATGGCGACGCGGT GGCCGTGCTCCGCGACGCGCTGGCGAAGGTGCTCGTCCACTACCACCCGCTGGCGGGGCG GCTGACGATCAGCGCGGAGATGAAGCTCGCCGTGGAGCTCACCGGCGAGGGCGCCGTGTT CGTCGCCGCCGACGCCGGGTACGACCTCGCCGACGTCGGCGACCTCACCAAGCCCGACCC CGCCGCGCTCGGCCACCTCGTCTACTCCATCCCCGGCGCCAAGAACATCCTCGAGATGCC CCCCATGACGGCGCAGGTGACACGGTTCAAGTGCGGCGGCTTCGCGCTGGGGCTCGCCAT GAACCACTGCATGTTCGACGGGCTGGGCGCCATGGAGTTCGTCAACTCGTGGGCGGAGAC GGCGCGCGGCGCCGCCGAGCTCACCGTGCCGCCGTTCCTGGACCGCACGTTGCTCCGCGC GCGCGACCCCCCGGTGATCTCCTTTGAGCACCACGAGTTCGAGGAGATCCCCGACGTCTC CGACACGGCGGCGCTCTACGCCGACCAGGACCTCCTCTACCGCTCCTTCTGCTTCGACCC GGACCGCCTCGAGCGCGTCCGCGCGCTCGCCCTCGCCGGCGCCGGCGCCGAGAACGGCGA CGACCTCGTCGGCGGGCGGTGCACCACCTTCGAGGCGCTGTCGGGGCTCGTCTGGCGCGC GCGCACCCGCGCCCTGGGCCTCGCGCCGGAGCAGCGGACGAAGCTGCTGTTCGCCGTGGA CGGGCGGCGCCGCTTCGAGCCGCCGCTCCCCCGCGGCTACTTCGGCAACGGCATCGTGCT GACGAACGCGGTGGCGACCGCCGGCGAGCTGCTGTCGTCGCCGCCGTCGCGCGCGGCGGG GCTGGTGCAGGCGGCGGTGCGGATGGTGACCGACGGGTACATGCGGTCGGCGGTGGACTA CTTCGAGGCGACGCGGGCGCGGCCGTCGCTGGCGTCGACGCTGCTGATCACGACGTGGTC CAGGCTCGCCTTCCACGGCGCCGACTTCGGCTGGGGCGCGCCGGCGATGTCCGGCCCCGT CACGCTGCCGGAGAAGGAGGTCATCCTCTTCCTCGCGCACGGCGAGGAGAGGAAGAGCAT CAACGTCCTCCTCGGCCTCCCGGCGTCCGCCATGGACGCCTTCCAAGAGCTCATGGACGA GATATGATGAAAAAAAAGGATGGATTGCATTGGTCACATGGTTTATGATGCATATGGATG GTGTTCTTCTTTTCTTTTATGGTTAAATTTAAAATTTGCATGGGTTTATACACTTTGTAG TGTGGTGTTTTGTTTTTAATGATTAATTGTGGTGAGCATGTGTTAAATGTTAATCAGCTG CTCTATGTTGGTGTTTGATAAGAGGCACTGTGGCAAAATGGTTGTAACTTGTAAGATGGT TTAAT