Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0499600-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:17785388:17792540:1 gene:Os11g0499600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYSTEROID DEHYDROGENASE 1 description:Hydroxysteroid dehydrogenase, Cuticle formation, Lipid homeostasis (Os11t0499600-01);Similar to cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. (Os11t0499600-02)
Sequence	ATGCACGTGGGGCTAACGCTGGTGCTGCTCGTCTACCTCCCCATCGCCTTCGCCTGCCGC GCCCTGGGCAGGCTGCTCGTCAGGCCCTTCGTCTCCGGCGAGGACCTCCGCGGCAAGGTC GTGCTCGTCACCGGCGCCTCCTCCGGCATCGGCGAGCATCTAGTGTACGAGTACGCGAAG AAGGGGGCGTGCGTGGCGCTGACGGCGAGGACGGAGATCGCCCTGCGCGCAGTGGCGAAG ACGGCGCGCGACCTCGGCGCGCCGGACGTGCTCGTCGTGCCGGCGGACATCACCAAGGTC GACGACGCCAAGCGCGCCGTCGAGGAGACCGTCGCCCACTTCGGCAAATTGAATCACCTG GTGGCCAACGCAGGGATCTGGTCCAGTTGCTTCTTCGAAGAAATTACCAACATAACCGCC TTCCACAACGTGATTGATCTCAACTTCTGGGGCGCCGTGTACCCGACCTACTTCGCGTTG CCGTACCTGAAAGCCAGCCGTGGCAACATCGTCGTCACCTCCTCTGTCGCCGGCAGGGTC CCGACGGCCAGGATGAGCTTCTACAACGCGAGTAAGGGCGCGGTGATCAGGTTCTACGAA ACCCTAAGGGCTGAGCTGGGCTCACATGTCCGTGTCACCATTCTCACCCCGGGCTATGTC GTCTCCAACCTCACCATGGGCAAAGGCATCCAGAAGGACGGCCATGTCGGCATTGACGAG GAGGCTCGCGACATCAATGTGGGGCCGCTGCCGGTGGGGAAGACGGAGACGCTGGCGAAG GTGGTGGTGGCGGCGGTGCGGCGGGGCGACTACTACGTGACATGGCCCGGGTGGTACTGG CCGTTCCACATGGTGATGTGCACGGCGCCGGAGCTCGTCGACTGGTTCTCCCGGACCTTC TACGTCTCCAAGTCCAGCGACCACGATGGCGACGCCCTCAGCAAGAAGATCCTCGAGGCC GTCGGCGGCAAGAAGTTCCTCTACCCCAAGACCATCCGCAGCCATGCCATCGCCGCTAGC TAA

Peptide Sequence

PEP ID	Os11t0499600-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:17785388:17792540:1 gene:Os11g0499600 transcript:Os11t0499600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYSTEROID DEHYDROGENASE 1 description:Hydroxysteroid dehydrogenase, Cuticle formation, Lipid homeostasis (Os11t0499600-01);Similar to cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. (Os11t0499600-02)
Sequence	MHVGLTLVLLVYLPIAFACRALGRLLVRPFVSGEDLRGKVVLVTGASSGIGEHLVYEYAK KGACVALTARTEIALRAVAKTARDLGAPDVLVVPADITKVDDAKRAVEETVAHFGKLNHL VANAGIWSSCFFEEITNITAFHNVIDLNFWGAVYPTYFALPYLKASRGNIVVTSSVAGRV PTARMSFYNASKGAVIRFYETLRAELGSHVRVTILTPGYVVSNLTMGKGIQKDGHVGIDE EARDINVGPLPVGKTETLAKVVVAAVRRGDYYVTWPGWYWPFHMVMCTAPELVDWFSRTF YVSKSSDHDGDALSKKILEAVGGKKFLYPKTIRSHAIAAS

Transcript Sequence

Transcript ID	Os11t0499600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:17785388:17792540:1 gene:Os11g0499600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYDROXYSTEROID DEHYDROGENASE 1 description:Hydroxysteroid dehydrogenase, Cuticle formation, Lipid homeostasis (Os11t0499600-01);Similar to cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. (Os11t0499600-02)
Sequence	CGTTCGTGAACGGGTTCCTGAGCGTGTTCATGCACGTGGGGCTAACGCTGGTGCTGCTCG TCTACCTCCCCATCGCCTTCGCCTGCCGCGCCCTGGGCAGGCTGCTCGTCAGGCCCTTCG TCTCCGGCGAGGACCTCCGCGGCAAGGTCGTGCTCGTCACCGGCGCCTCCTCCGGCATCG GCGAGCATCTAGTGTACGAGTACGCGAAGAAGGGGGCGTGCGTGGCGCTGACGGCGAGGA CGGAGATCGCCCTGCGCGCAGTGGCGAAGACGGCGCGCGACCTCGGCGCGCCGGACGTGC TCGTCGTGCCGGCGGACATCACCAAGGTCGACGACGCCAAGCGCGCCGTCGAGGAGACCG TCGCCCACTTCGGCAAATTGAATCACCTGGTGGCCAACGCAGGGATCTGGTCCAGTTGCT TCTTCGAAGAAATTACCAACATAACCGCCTTCCACAACGTGATTGATCTCAACTTCTGGG GCGCCGTGTACCCGACCTACTTCGCGTTGCCGTACCTGAAAGCCAGCCGTGGCAACATCG TCGTCACCTCCTCTGTCGCCGGCAGGGTCCCGACGGCCAGGATGAGCTTCTACAACGCGA GTAAGGGCGCGGTGATCAGGTTCTACGAAACCCTAAGGGCTGAGCTGGGCTCACATGTCC GTGTCACCATTCTCACCCCGGGCTATGTCGTCTCCAACCTCACCATGGGCAAAGGCATCC AGAAGGACGGCCATGTCGGCATTGACGAGGAGGCTCGCGACATCAATGTGGGGCCGCTGC CGGTGGGGAAGACGGAGACGCTGGCGAAGGTGGTGGTGGCGGCGGTGCGGCGGGGCGACT ACTACGTGACATGGCCCGGGTGGTACTGGCCGTTCCACATGGTGATGTGCACGGCGCCGG AGCTCGTCGACTGGTTCTCCCGGACCTTCTACGTCTCCAAGTCCAGCGACCACGATGGCG ACGCCCTCAGCAAGAAGATCCTCGAGGCCGTCGGCGGCAAGAAGTTCCTCTACCCCAAGA CCATCCGCAGCCATGCCATCGCCGCTAGCTAATATAATGCTCATATATCACACTGATTGA TCGATCCATCCAAGCTATAGTTGCAACCTACCTATATATATATAAACTTTTTTTATACAT GATGATATCATGATCTTTTGATAATGATGATTGGTTTGTTTTAGCATAAGAAATACTTCA GTTAAAGAGGATTGGGAGATGAAATGGGTGTGTGGGTGGATATATAGTGTACTTGTTCTT TTACTACCCCTTTTTTTTTTGCATTTGGGCTTTTTTTTAGTTTCTTTTTTTCTTTTTTCT CTTTAAAAAATCAATGTAAGCAATGTGATGTGAATCTATTCGGATATATATGTCT