Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0496600-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:17631574:17640991:-1 gene:Os11g0496600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 19 description:Hypothetical conserved gene. (Os11t0496600-00)
Sequence	ATGGAGTGGGCGGCGGCGGCGACGAAGGCGGCTTCGTGGGGCATGGCGGTGGCGGCGGCG GCGGCGGCGGACGACGCCGGCCCGACCATGCTGTCCTTCGCCGGGCCGTCGTCGTCGTCG TCTTCCCCCGACGCCGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCTGCACGACTTC TCCGTCCGCGCCAGGCCGGCGGCGGCGGCGCCGGCGACGAGGAGGGCGCGCGGAGGGTCG GGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGAGGCGTGCTCGGTCGACGGGTGCCGGTCG GACCTCAGCCGGTGCCGCGACTACCACCGCCGCCACAAGGTCTGCGAGGCCCACGCCAAG ACGCCGGTGGTCGTCGTCGCCGGCCAGGAGCAGCGCTTCTGCCAGCAATGCAGCCGATTT CACAATCTGGCTGAGTTTGACGATGGGAAAAAAAGTTGCCGGAAACGGCTGGATGGTCAT AACAGGCGTCGAAGAAAGCCACAGCATGATGCATTGAACCCTAGGAGTTTCCTTCCGTAT CATCAAGCGAATCAGTTTTCAGTCTACCCGCAAACATTTCCGATAGCTGATCAGAACGCC GACGCCTTAATGCGTCCGCTTGATCGTCACCCTCCCTTCTCCATCTCATTCTCAGGGACC TTCCGGGAACCGAAGCAGTTCCCCTTTATGCAAGATGGCGGGAGCGGCCTCGGCGCAGCG CGCCACGATCTCCTGCGGCCCTTCTCTTCCCCAGAAGATGGAGCCAACATTACCACAACC CGCAGCGCATGCAACGGCGTCCCCCACGGGCTGGACCCGGAGTGTGCTCTCTCTCTTCTG TCATCGTCGCTGCATCCCTCCCCCGCTGCCGGCATCTCCAGCGCAACAGCTCCACCGCAG TTCGCCCCCTCTTCTTTCAGCAGAATCGCCGCCTCGTCGCAAGCCGTAACCACCGCATTC GCATCAGATGGAGGATCAGTTGCCGGTGACCATGTCTTGGTTCCTGCTGTCACATATGAA GATCCTTCCCAAGCAATGCCATTCTCTTGGCAGGTGTAG

Peptide Sequence

PEP ID	Os11t0496600-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:17631574:17640991:-1 gene:Os11g0496600 transcript:Os11t0496600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 19 description:Hypothetical conserved gene. (Os11t0496600-00)
Sequence	MEWAAAATKAASWGMAVAAAAAADDAGPTMLSFAGPSSSSSSPDAAAAAAAAAAAALHDF SVRARPAAAAPATRRARGGSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAK TPVVVVAGQEQRFCQQCSRFHNLAEFDDGKKSCRKRLDGHNRRRRKPQHDALNPRSFLPY HQANQFSVYPQTFPIADQNADALMRPLDRHPPFSISFSGTFREPKQFPFMQDGGSGLGAA RHDLLRPFSSPEDGANITTTRSACNGVPHGLDPECALSLLSSSLHPSPAAGISSATAPPQ FAPSSFSRIAASSQAVTTAFASDGGSVAGDHVLVPAVTYEDPSQAMPFSWQV

Transcript Sequence

Transcript ID	Os11t0496600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:17631574:17640991:-1 gene:Os11g0496600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE SQUAMOSA PROMOTER-BINDING-LIKE 19 description:Hypothetical conserved gene. (Os11t0496600-00)
Sequence	ATGGAGTGGGCGGCGGCGGCGACGAAGGCGGCTTCGTGGGGCATGGCGGTGGCGGCGGCG GCGGCGGCGGACGACGCCGGCCCGACCATGCTGTCCTTCGCCGGGCCGTCGTCGTCGTCG TCTTCCCCCGACGCCGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCTGCACGACTTC TCCGTCCGCGCCAGGCCGGCGGCGGCGGCGCCGGCGACGAGGAGGGCGCGCGGAGGGTCG GGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGAGGCGTGCTCGGTCGACGGGTGCCGGTCG GACCTCAGCCGGTGCCGCGACTACCACCGCCGCCACAAGGTCTGCGAGGCCCACGCCAAG ACGCCGGTGGTCGTCGTCGCCGGCCAGGAGCAGCGCTTCTGCCAGCAATGCAGCCGATTT CACAATCTGGCTGAGTTTGACGATGGGAAAAAAAGTTGCCGGAAACGGCTGGATGGTCAT AACAGGCGTCGAAGAAAGCCACAGCATGATGCATTGAACCCTAGGAGTTTCCTTCCGTAT CATCAAGCGAATCAGTTTTCAGTCTACCCGCAAACATTTCCGATAGCTGATCAGAACGCC GACGCCTTAATGCGTCCGCTTGATCGTCACCCTCCCTTCTCCATCTCATTCTCAGGGACC TTCCGGGAACCGAAGCAGTTCCCCTTTATGCAAGATGGCGGGAGCGGCCTCGGCGCAGCG CGCCACGATCTCCTGCGGCCCTTCTCTTCCCCAGAAGATGGAGCCAACATTACCACAACC CGCAGCGCATGCAACGGCGTCCCCCACGGGCTGGACCCGGAGTGTGCTCTCTCTCTTCTG TCATCGTCGCTGCATCCCTCCCCCGCTGCCGGCATCTCCAGCGCAACAGCTCCACCGCAG TTCGCCCCCTCTTCTTTCAGCAGAATCGCCGCCTCGTCGCAAGCCGTAACCACCGCATTC GCATCAGATGGAGGATCAGTTGCCGGTGACCATGTCTTGGTTCCTGCTGTCACATATGAA GATCCTTCCCAAGCAATGCCATTCTCTTGGCAGGTGTAGAGCAGAGGCTGTGATTTTGCT GTTCCTGCAGAGTT