Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0491400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:17379764:17382897:1 gene:Os11g0491400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0491400-01)
Sequence

ATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCCGTTCCCGATTCTGGTCA
GGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATATCCCTGTAAATATAAGG
AAACTCAGAAAGCAAAACAGACGTCAGCGGGTGATCACGTTGTCTAAAAGTTCTGCATTA
CAAGATCCTGTTTCCTCTGTGAAGCCTTCACGCCTTCTGCAAACAGATGAACTACGTATA
TTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGATTGGAAGAATCTGATGCA
TTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGTCTTTGCTAGATAAGAAC
GCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCCTGTTACAAAGAGTACCA
GCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGAAATTGCTTCCCTTCCAA
AGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGCAAAGAATTAAAGAAATC
TGGGTTGGTCTTGAGTCAGGCTCATGGAGAATAGATAATTTAAGCTTGAAAGTTATCCAT
GGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAACTCAAGTTCAATGGTCTG
CAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATGGAGCTTCAGTTGTGGAA
GCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTTCTGATCTCCAAGAGGGG
CAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGAAAGAGGATGGCTTGAAA
GAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTGCTATTGTGATAACAGGT
TTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCTCGTTCCTTGTTGGAGGC
ATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAGACGGGTTGCCGGCGCTT
AATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAGGTTTCAGTGGCATAAGG
AGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTGTTGCATTGAAATATGGA
GCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTGTTGGCACTGCAGGGTTC
CTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCTTGCAGAGTAATTTGAAG
GCTGAAGACCGATCTGGAGACTGA

Peptide Sequence

PEP ID

Os11t0491400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:17379764:17382897:1 gene:Os11g0491400 transcript:Os11t0491400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0491400-01)
Sequence

MVILCASHIGISTTRSRFWSGWLSQNGCPRMCYHIPVNIRKLRKQNRRQRVITLSKSSAL
QDPVSSVKPSRLLQTDELRIFHNSVPEEIISTVRLEESDAFYMLELSTSREFSSSLLDKN
AAILICIIDANGDSLLQRVPAAYCNHSAQGREAEKLLPFQSGSVDVVTFRGSKLQRIKEI
WVGLESGSWRIDNLSLKVIHGQLNTPPDLEETPELKFNGLQYTFDKLSMLLGEDGASVVE
ARPVAVTDLTGISLSDLQEGQLSSASTASSILEMKEDGLKEYADLKQSLLLYDLAIVITG
FSAFTLASNDSAALSFLVGGIGGFLYLLLLQKSVDGLPALNSPSEAGSAQPSVKGFSGIR
RPWLILSLLMVAGAVALKYGAGGDKLEMTPVELFVGTAGFLANKVAIVLAAFKPLQSNLK
AEDRSGD

Transcript Sequence

Transcript ID

Os11t0491400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:17379764:17382897:1 gene:Os11g0491400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0491400-01)
Sequence

ACACGTCTCTTCACGCCACCACGGGGCACCTCGCCGCCGCCGCCGACGTCGCCATCGCCG
AGTTCCTCCACGCAACAATCCGCTTCCCCCGCAAGGAAGCAGCGCCGCGCGGCCGTCTCC
GACCTGCGAATCCGCCATTAAATCCGCGCGGCAGGGGGGGTGCTCTGCGTCGCCGGTGGG
CGCGCGTAACCTTTTCTCTCCCCTCCCCCCCTCCCCGTCTCCCGATCTGCAGGGCTGCCG
GCCGGCCGGCGACCTGAGTTTGGGAGGGTTTGACGCGCGGCTCGCCTCCATCTCCGTCGG
AAACGAGCTCAAAGAAAATGGTAATCCTCTGTGCTAGCCACATTGGCATCAGTACTACCC
GTTCCCGATTCTGGTCAGGATGGTTGTCGCAGAATGGCTGTCCCAGAATGTGTTATCATA
TCCCTGTAAATATAAGGAAACTCAGAAAGCAAAACAGACGTCAGCGGGTGATCACGTTGT
CTAAAAGTTCTGCATTACAAGATCCTGTTTCCTCTGTGAAGCCTTCACGCCTTCTGCAAA
CAGATGAACTACGTATATTTCACAACAGTGTACCTGAAGAGATAATTTCAACAGTCAGAT
TGGAAGAATCTGATGCATTCTATATGCTAGAACTTAGCACGAGCAGAGAATTTAGCTCGT
CTTTGCTAGATAAGAACGCTGCCATCTTAATCTGTATAATTGATGCCAATGGTGATTCCC
TGTTACAAAGAGTACCAGCAGCCTATTGTAATCATTCTGCACAAGGCAGAGAGGCCGAGA
AATTGCTTCCCTTCCAAAGCGGTTCAGTTGATGTTGTCACCTTTAGAGGCTCTAAGCTGC
AAAGAATTAAAGAAATCTGGGTTGGTCTTGAGTCAGGCTCATGGAGAATAGATAATTTAA
GCTTGAAAGTTATCCATGGACAGTTGAATACACCTCCAGATCTGGAGGAAACACCTGAAC
TCAAGTTCAATGGTCTGCAGTACACATTTGACAAACTCAGCATGCTGCTTGGAGAGGATG
GAGCTTCAGTTGTGGAAGCAAGACCTGTGGCTGTCACTGATCTCACGGGAATAAGCCTTT
CTGATCTCCAAGAGGGGCAATTATCCTCAGCAAGCACAGCTTCAAGCATCCTTGAAATGA
AAGAGGATGGCTTGAAAGAGTATGCTGACCTCAAGCAGTCGCTGCTGCTCTACGATCTTG
CTATTGTGATAACAGGTTTCTCTGCCTTCACCTTGGCTTCAAATGACAGTGCTGCCCTCT
CGTTCCTTGTTGGAGGCATTGGAGGATTTCTCTATCTGTTGCTGCTCCAAAAATCTGTAG
ACGGGTTGCCGGCGCTTAATTCACCATCAGAAGCTGGCAGTGCCCAGCCCTCTGTGAAAG
GTTTCAGTGGCATAAGGAGGCCATGGTTAATATTGTCACTGTTAATGGTCGCTGGAGCTG
TTGCATTGAAATATGGAGCGGGTGGTGACAAACTTGAAATGACGCCAGTCGAGCTCTTTG
TTGGCACTGCAGGGTTCCTGGCGAACAAGGTTGCCATTGTTCTCGCGGCATTCAAACCCT
TGCAGAGTAATTTGAAGGCTGAAGACCGATCTGGAGACTGAACATAGTCAGGCTGCCTTG
AATATACTAACATTTATATAGCGGCTATACAGTATCATGATCTGAATGTTAATTATCGAA
GTGCCTAGTTCAAGTTTCCAGAGGGAACTTGAGCCTTATCTCTAGCTCACAAGCACAGCT
GCCGATCACAAATGCTCTTCTTGAATCGTAAGCATTTCTTTAAGGGTTCAACTCGGATAT
GAATTTTTCATCTGAAGTATACCGAAACTTCACTGATTTCACATCACAGGCATGGAGATT
GGCAGTGTGGCCTATATCAACATTCCAGACATTTGAACAGATCCAAATGATAATCTAGGT
GACATAGTATAGATGTATAGTCACATGATAGTGCCATAGGCTTATAGCAGAACAATATAT
TCTTCAGTGTATGTAAATCTGGTATACTAATGGTTACAATTTTAATGATTATGTAGCAGT
AATACTGCTGCTTCTAGCAGAATATATTATATTATTGGTGTATATAAATCCGGTACTAAT
GATTCAAATGTAATAATTACAATGTATGAAT