Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0490100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:17284028:17285405:1 gene:Os11g0490100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF579, plant family protein. (Os11t0490100-01)
Sequence

ATGAAGATGCCGGGGCGCCTGCTCGCCGCCGGAGCGGCGGCGCTGCTGGTGGCGGCGTCG
GTGATGGTGGCGACGCTGCTGACGGCGCCGCTGCCGTTCCTGCCGTCGCTGATGCCGTGC
CTGCCCGCGGTGACCGCGCCGTCGGGGTCCGGGTACTCGCCGCCGGGCCTCGCGGCCCTC
GCCGACGCCGCCGTGAGGTACGCCACGACGCCGACCGTGCCGCAGCAGTCGCGCGCCGAG
ATCTCGCTGTCGCTGGCCGTGCTCCGCCGCCGCGCGCCGCTGCGGCTGCTGGTGTTCGGC
CTGGGCCACGACTCGCCGCTGTGGCACGCGCTCAACCCGGGCGGCGCCACCGTGTTCCTC
GAGGAGGACCCGTCCTGGTACAGCGTCGTGCGGGGCCAGTCGCCGTTCCTCCGCGGCCAC
CTCGTCGCCTACCGCACGCGCCTCGACCACGCCGACCGCCTCCTCGCCACCTACAAGGAC
CACCCCTCCTGCCTCCCCGGCGGCGGCGGCAATGGCGGCGGCGACGTGCCGCGCGTGCGG
GGGAACGCGGAGTGCCCGCTGGCGCTGCACAACCTGCCGGCGGAGGTGTACGAGAAGGAG
TGGGACATGGTGATGATCGACGCGCCCAAGGGGTACTTCGCGTCGGCGCCGGGGAGGATG
GCGGCGGTGTGGACGGCGGCGGCCATGGCGCGCGGGCGGCGCGGCGAGGGCGACACCGAC
GTGTTCCTCCACGACGTCGACCGCCGCGTGGAGAAGGCCTACGCCGAGGAGTTCCTCTGC
GAGAGGTTCCGCGTCGGCGCCACCGGCCGCCTCTGGCATTTCAGGATCCCGCCGGCGTCG
CGCCGCGGGAACGGCACGGCGGCCGCCGGCGGCGCCGGCGCCGGCGATGGGCGGCGACCC
TTCTGCTAA

Peptide Sequence

PEP ID

Os11t0490100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:17284028:17285405:1 gene:Os11g0490100 transcript:Os11t0490100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF579, plant family protein. (Os11t0490100-01)
Sequence

MKMPGRLLAAGAAALLVAASVMVATLLTAPLPFLPSLMPCLPAVTAPSGSGYSPPGLAAL
ADAAVRYATTPTVPQQSRAEISLSLAVLRRRAPLRLLVFGLGHDSPLWHALNPGGATVFL
EEDPSWYSVVRGQSPFLRGHLVAYRTRLDHADRLLATYKDHPSCLPGGGGNGGGDVPRVR
GNAECPLALHNLPAEVYEKEWDMVMIDAPKGYFASAPGRMAAVWTAAAMARGRRGEGDTD
VFLHDVDRRVEKAYAEEFLCERFRVGATGRLWHFRIPPASRRGNGTAAAGGAGAGDGRRP
FC

Transcript Sequence

Transcript ID

Os11t0490100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:17284028:17285405:1 gene:Os11g0490100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF579, plant family protein. (Os11t0490100-01)
Sequence

GCACACGCCCACGCGCTCCCCTCGCACGCCACCGGACGAACACCTCGCCGACAACCTTTG
CTCCGGCGACCGGAGGTCGGAGAGAGAGAAGAGAGATGAAGATGCCGGGGCGCCTGCTCG
CCGCCGGAGCGGCGGCGCTGCTGGTGGCGGCGTCGGTGATGGTGGCGACGCTGCTGACGG
CGCCGCTGCCGTTCCTGCCGTCGCTGATGCCGTGCCTGCCCGCGGTGACCGCGCCGTCGG
GGTCCGGGTACTCGCCGCCGGGCCTCGCGGCCCTCGCCGACGCCGCCGTGAGGTACGCCA
CGACGCCGACCGTGCCGCAGCAGTCGCGCGCCGAGATCTCGCTGTCGCTGGCCGTGCTCC
GCCGCCGCGCGCCGCTGCGGCTGCTGGTGTTCGGCCTGGGCCACGACTCGCCGCTGTGGC
ACGCGCTCAACCCGGGCGGCGCCACCGTGTTCCTCGAGGAGGACCCGTCCTGGTACAGCG
TCGTGCGGGGCCAGTCGCCGTTCCTCCGCGGCCACCTCGTCGCCTACCGCACGCGCCTCG
ACCACGCCGACCGCCTCCTCGCCACCTACAAGGACCACCCCTCCTGCCTCCCCGGCGGCG
GCGGCAATGGCGGCGGCGACGTGCCGCGCGTGCGGGGGAACGCGGAGTGCCCGCTGGCGC
TGCACAACCTGCCGGCGGAGGTGTACGAGAAGGAGTGGGACATGGTGATGATCGACGCGC
CCAAGGGGTACTTCGCGTCGGCGCCGGGGAGGATGGCGGCGGTGTGGACGGCGGCGGCCA
TGGCGCGCGGGCGGCGCGGCGAGGGCGACACCGACGTGTTCCTCCACGACGTCGACCGCC
GCGTGGAGAAGGCCTACGCCGAGGAGTTCCTCTGCGAGAGGTTCCGCGTCGGCGCCACCG
GCCGCCTCTGGCATTTCAGGATCCCGCCGGCGTCGCGCCGCGGGAACGGCACGGCGGCCG
CCGGCGGCGCCGGCGCCGGCGATGGGCGGCGACCCTTCTGCTAAGGAAGTAAGGATTGCG
ATTTTTGGAGGGGCTTTTTTACAAAATGGCCTCGATTAAGCGGGTGAAATACAAATACTG
CTACTACTACTACGAAAATACGATCGTCGTGTAGGAAATTTCCGGATTCCTCTATCCTCT
GCCACTTGCAAATTCAAAACTTGGGATATTTTAAATTTGAGGTAAACATTCTGAACAGAG
ATAGATGCTAGAGAGTGATTTGAGTCTCTCGAGATCACTAAAGTTGGTGTGAACAACAAC
ACGGTGTGTATCTCTTTTCAGTTTGTAATAATAGAAACAATGAGGTGATTTTGTTTTTTT
TTTTTGGTATGAGTACATACTAATTTTTGAATAACATTGGTACATCAGGTTAACCTTG