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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0484700-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:17081029:17081391:-1 gene:Os11g0484700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d12, lipid transfer protein d12, type D non-specific lipid transfer protein 12 description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os11t0484700-00)
Sequence

ATGGCGAGGCTAATTGCATCATCGTCTTCATCAGCTGCCGTGTGCTTCGTCGTCCTCCTG
ATCATCGCCATGGCCATGGCGGCGGCGGCGACGGTGTCGCCGTCGGCGGCGGACAAGTGC
GAGAAGGACCTGGACCTGCTGATGGGGAGCTGCGAGGGGTACCTGCGGTTCCCGGCGGAG
GCGAAGGCGGCGCCGTCGAGGGCGTGCTGCGGCGCGGTGAGGAGGGTGGACGTGGGGTGC
CTGTGCGGAATGGTGACGCCGGAGGTGGAGCAGTACGTGTGCATGGACAAGGCCGTCTAC
GTCGCCGCCTACTGCCACCGCCCACTCCTCCCTGGCTCCTACTGCGGCAGTAAGCTTGTG
TGA

Peptide Sequence

PEP ID

Os11t0484700-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:17081029:17081391:-1 gene:Os11g0484700 transcript:Os11t0484700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d12, lipid transfer protein d12, type D non-specific lipid transfer protein 12 description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os11t0484700-00)
Sequence

MARLIASSSSSAAVCFVVLLIIAMAMAAAATVSPSAADKCEKDLDLLMGSCEGYLRFPAE
AKAAPSRACCGAVRRVDVGCLCGMVTPEVEQYVCMDKAVYVAAYCHRPLLPGSYCGSKLV

Transcript Sequence

Transcript ID

Os11t0484700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:17081029:17081391:-1 gene:Os11g0484700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d12, lipid transfer protein d12, type D non-specific lipid transfer protein 12 description:Bifunctional inhibitor/plant lipid transfer protein/seed storage domain containing protein. (Os11t0484700-00)
Sequence

ATGGCGAGGCTAATTGCATCATCGTCTTCATCAGCTGCCGTGTGCTTCGTCGTCCTCCTG
ATCATCGCCATGGCCATGGCGGCGGCGGCGACGGTGTCGCCGTCGGCGGCGGACAAGTGC
GAGAAGGACCTGGACCTGCTGATGGGGAGCTGCGAGGGGTACCTGCGGTTCCCGGCGGAG
GCGAAGGCGGCGCCGTCGAGGGCGTGCTGCGGCGCGGTGAGGAGGGTGGACGTGGGGTGC
CTGTGCGGAATGGTGACGCCGGAGGTGGAGCAGTACGTGTGCATGGACAAGGCCGTCTAC
GTCGCCGCCTACTGCCACCGCCCACTCCTCCCTGGCTCCTACTGCGGCAGTAAGCTTGTG
TGA