Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0484400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:17054072:17061369:1 gene:Os11g0484400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bifunctional dihydrofolate reductase-thymidylate synthase. (Os11t0484400-01)
Sequence	ATGGCTACAACTCTCTCCAATGGTGTTTCACAGAATGGCCCTCAGAGGAACTATCAGGTA GTTGTTGCTGCTACTCGCGACATGGGCATTGGAAAGGATGGGGTCTTGCCATGGAAGCTC CTTGGCGACCTTAAATTTTTCAAGGAGCTTACAGTGACTACAGCTGATCCTGTGAAGAAA AATGCTGTTATAATGGGGAGGAAAACATGGGAGAGTTTACCCCTTAAGGCTAGGCCATTG CCTGGCCGTTTGAACATCATATTGACTAGGTCTGGTAGTTTTGAGTTTGCAACAGTCGAA AATGTTGTTATCTGTGGAAGCATGAACTCTGCATTGGAACTACTATCATCAACTCCATAC TGTTTATCCATTGAGAAAGTTTTTGTTATAGGGGGTGGACAAGTACTAAGGGAATCTCTT AATGGACCTTCATGTGAGGCAGTCCATTTAACTGACATTCAGTCAAGCATTGAGTGTGAC ACCTTTATTCCTCCGATTGACTTATCGGTGTTCCAACCATGGTATTCATCTTTGCCTGTG GTAGAGAGCAACATTAGGCATTCGTTTGTGACCTATGTTCGGGTTAGAAAAACAATGGCA GAAACACATGACTCAAATGGCAAGGAATCAGCTAATGATGGTATCAAGAGTGACAAATTT GAAACCGAGAATTTCTCTTTTCTCCCTAAGTTGATATTTGACCGCCATGAGGAGTATCAC TATCTCAATCTTGTTGAAGATATTATAAGGAGTGGTGCTCAGAAAAATGACAGAACAGGA ACAGGGACATTATCGAAATTTGGTTGTCAGATGCGGTTCAACTTAAGGAATAGCTTCCCA TTGTTGACAACAAAGAAGGTATTTTGGAGGGGTGTTGTTGAAGAACTCCTGTGGTTCATC AGTGGCTCGACAAGTGCAAAGGTTTTACAAGAGAAAGGCATTCATATTTGGGATGGCAAT GCTTCGAGAGAGTATCTTGACAGTGTTGGCTTAGCACATAGGGAAGAAGGTGATCTAGGT CCAGTTTATGGATTTCAATGGCGACACTTTGGTGCTGAATATACCGACATGCATGCTGAC TATACTGGTAAAGGCTTTGATCAGCTAATGGATGTGATTGACAAGATCAAGAATAATCCT GACGATAGGCGAATTATCCTATCTGCGTGGAATCCTTCAGATCTCAAGAAGATGGCCCTT CCTCCTTGCCACATGTTTGCACAATTTTATGTTGAGAGCGGGGAGCTATCGTGCCAGATG TATCAACGCTCTGCTGATATGGGACTTGGTGTTCCATTCAACATTGCATCATATTCTCTT CTGACATACATGATTGCTCATGTTTGCGGTCTTTCTCCTGGAGAGTTTGTCCATGTTATT GGTGATGCCCATGTCTATAGAACACATGTGCGAGCTCTGGAGGAGCAAATCCAGAAGCTA CCTAAACCATTTCCAGTTTTGAAGATTAACCCTTTGAAGAAGGATATAGATTCTTTCGTG GCATCAGACTTCAAGCTGGTCGGTTATGATCCTCACCAGAAGATTGAAATGAAAATGGCA ATATAA

Peptide Sequence

PEP ID	Os11t0484400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:17054072:17061369:1 gene:Os11g0484400 transcript:Os11t0484400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bifunctional dihydrofolate reductase-thymidylate synthase. (Os11t0484400-01)
Sequence	MATTLSNGVSQNGPQRNYQVVVAATRDMGIGKDGVLPWKLLGDLKFFKELTVTTADPVKK NAVIMGRKTWESLPLKARPLPGRLNIILTRSGSFEFATVENVVICGSMNSALELLSSTPY CLSIEKVFVIGGGQVLRESLNGPSCEAVHLTDIQSSIECDTFIPPIDLSVFQPWYSSLPV VESNIRHSFVTYVRVRKTMAETHDSNGKESANDGIKSDKFETENFSFLPKLIFDRHEEYH YLNLVEDIIRSGAQKNDRTGTGTLSKFGCQMRFNLRNSFPLLTTKKVFWRGVVEELLWFI SGSTSAKVLQEKGIHIWDGNASREYLDSVGLAHREEGDLGPVYGFQWRHFGAEYTDMHAD YTGKGFDQLMDVIDKIKNNPDDRRIILSAWNPSDLKKMALPPCHMFAQFYVESGELSCQM YQRSADMGLGVPFNIASYSLLTYMIAHVCGLSPGEFVHVIGDAHVYRTHVRALEEQIQKL PKPFPVLKINPLKKDIDSFVASDFKLVGYDPHQKIEMKMAI

Transcript Sequence

Transcript ID	Os11t0484400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:17054072:17061369:1 gene:Os11g0484400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bifunctional dihydrofolate reductase-thymidylate synthase. (Os11t0484400-01)
Sequence	GATCTGCAGCGGCGGAGGAGAGAGAGACACCGCCGCCGCCGCCGCCGCCCTCCGGCGAAC TCGGCCGGGAGGCGCACGGCGTGGGACGGACACCAGCACCACCCTCCCTCTCTTCCTCTC CTTCCTCACCCCCCAACCCCCGACCCCCGACCCCCGACCCCCGTCTCGGTTCATCCGCGC GGCCTCCATTCCATCTCGGCGGCTCGAATCCAACCGAAGGTTGCAAGATTTTCGGGCATT AGCTGTGCACCCATTTCTCAATTCAGAAGACCTCAATCTCTGGAGGGCAGCAGAAAACTA AGGTCTTGCTGCTTTATTCAAACCCGACTGATAGCCATGGCTACAACTCTCTCCAATGGT GTTTCACAGAATGGCCCTCAGAGGAACTATCAGGTAGTTGTTGCTGCTACTCGCGACATG GGCATTGGAAAGGATGGGGTCTTGCCATGGAAGCTCCTTGGCGACCTTAAATTTTTCAAG GAGCTTACAGTGACTACAGCTGATCCTGTGAAGAAAAATGCTGTTATAATGGGGAGGAAA ACATGGGAGAGTTTACCCCTTAAGGCTAGGCCATTGCCTGGCCGTTTGAACATCATATTG ACTAGGTCTGGTAGTTTTGAGTTTGCAACAGTCGAAAATGTTGTTATCTGTGGAAGCATG AACTCTGCATTGGAACTACTATCATCAACTCCATACTGTTTATCCATTGAGAAAGTTTTT GTTATAGGGGGTGGACAAGTACTAAGGGAATCTCTTAATGGACCTTCATGTGAGGCAGTC CATTTAACTGACATTCAGTCAAGCATTGAGTGTGACACCTTTATTCCTCCGATTGACTTA TCGGTGTTCCAACCATGGTATTCATCTTTGCCTGTGGTAGAGAGCAACATTAGGCATTCG TTTGTGACCTATGTTCGGGTTAGAAAAACAATGGCAGAAACACATGACTCAAATGGCAAG GAATCAGCTAATGATGGTATCAAGAGTGACAAATTTGAAACCGAGAATTTCTCTTTTCTC CCTAAGTTGATATTTGACCGCCATGAGGAGTATCACTATCTCAATCTTGTTGAAGATATT ATAAGGAGTGGTGCTCAGAAAAATGACAGAACAGGAACAGGGACATTATCGAAATTTGGT TGTCAGATGCGGTTCAACTTAAGGAATAGCTTCCCATTGTTGACAACAAAGAAGGTATTT TGGAGGGGTGTTGTTGAAGAACTCCTGTGGTTCATCAGTGGCTCGACAAGTGCAAAGGTT TTACAAGAGAAAGGCATTCATATTTGGGATGGCAATGCTTCGAGAGAGTATCTTGACAGT GTTGGCTTAGCACATAGGGAAGAAGGTGATCTAGGTCCAGTTTATGGATTTCAATGGCGA CACTTTGGTGCTGAATATACCGACATGCATGCTGACTATACTGGTAAAGGCTTTGATCAG CTAATGGATGTGATTGACAAGATCAAGAATAATCCTGACGATAGGCGAATTATCCTATCT GCGTGGAATCCTTCAGATCTCAAGAAGATGGCCCTTCCTCCTTGCCACATGTTTGCACAA TTTTATGTTGAGAGCGGGGAGCTATCGTGCCAGATGTATCAACGCTCTGCTGATATGGGA CTTGGTGTTCCATTCAACATTGCATCATATTCTCTTCTGACATACATGATTGCTCATGTT TGCGGTCTTTCTCCTGGAGAGTTTGTCCATGTTATTGGTGATGCCCATGTCTATAGAACA CATGTGCGAGCTCTGGAGGAGCAAATCCAGAAGCTACCTAAACCATTTCCAGTTTTGAAG ATTAACCCTTTGAAGAAGGATATAGATTCTTTCGTGGCATCAGACTTCAAGCTGGTCGGT TATGATCCTCACCAGAAGATTGAAATGAAAATGGCAATATAATTTGGTGGCTAAGCTGGG ACCCCCAGTCACTATGTGAGCTTGGAGAAACTTAAGCAGGAAAACCTTATGCGAACATCG CACTAGCTTACTTTTTTTTTTTTAGTGGTGGTGCTGGATGTTCATTTGGACCTATGTTCT CCATTTATCCGCGATTGTACTTTTATCTCGGTCGCCGATCTAAACCCTACGAAAACACCG GTCACTGGCTCCCCCTTTTATTTGGACCCAGTGAATGATGTTAGAGCTTGTTTCGAGTTG ACACCATGTTGGAAGAGGCCAACCGGGCGTTATGTGTAGCTCGGCGATGGATGTCATGTA CCCTGACTGCGACACACATTTTGGTCATTTTGGTGAAGCTTCGGAGTGCCTCTGGTGTTG CTGGACGACACCTACTAATTGTCTCCATCTGAGATTTTTCTTTCCACATGTTTGGAACAC CAGATGATGGGTGATGATGCTGACCTGTGGATTTGGAGTTGTTCAGCATATGTTGGCACT TTTTCTGATGTTTGTG