Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0484300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:17046950:17052914:1 gene:Os11g0484300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 2 description:Similar to Mcm2-prov protein. (Os11t0484300-01)
Sequence	ATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGGGTCGCCGGGGTTCAGCACAGAC AGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCACCGACCCGTCCTCCTACTCGGAC GACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGAGGTCGACCCCAACGTGCTCCCC GAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGACGGGGAGGACCTCTTCAACGAC AACTACCTCGATGATTACCGGAGGATGGATGAGCAGGACCAGTATGAATCGGTTGGGTTA GATGACTCGATAGAGGATGAAAGGAACCTGGATGAGATCATGGCAGATAGAAGGGCTGCT GAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGCAGCACCTGATAGGAAATTGCCA CGGATGCTACATGATCAAGACACAGATGAGGATATGAGCTTCAGGCGTCCTAAAAGGCAC AGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACCAAGAAGTGATGATGACGGTGAT GGTGCCACGCCTAGTTCACCTGGAAGATCTCAGCGTGGAATGTATTCTGGAGGGGATGTA CCTATGACTGACCAGACTGATGATGATCCATATGAGGATGAATTTGATGAAGAAGATGAG ATGAACATGTACCGTGTACAAGGAACTCTTAGAGAGTGGGTCACAAGAGATGAAGTCCGC CGCTTTATCGCAAAGAAGTTCAAAGAATTCCTTCTAACATATGTAAACCCAAAGAATGAA CAAGGAGAGTTTGAGTATGTTCGACTAATCAATGAGATGGTTCTAGCTAACAAATGCAGC TTAGAGATAGATTACAAGCAATTTATTTATATACATCCAAACATTGCTATATGGTTGGCT GATGCACCTCAATCGGTGCTAGAAGTTATGGAGGAAGTTGCCAAAAATGTTGTTTTTGAT CTCCATAAGAACTATAGGAACATTCATCAAAAAATCTATGTCCGAATAACCAATCTTCCT GTCTACGACCAAATACGCAATATCAGGCAAATCCATCTGAACACAATGATTCGAATTGGT GGTGTTGTTACTCGGAGATCAGGTGTTTTTCCTCAGCTACAACAGGTCAAGTTTGACTGC AGCAAATGTGGGACTGTCCTGGGCCCCTTCTTCCAGAACTCTTACACTGAAGTCAAGGTT GGATCCTGCCCTGAGTGCCAATCCAAAGGGCCATTCACCATCAATGTTGAGCAAACCATA TATAGGAACTACCAGAAACTCACTCTTCAGGAAAGCCCAGGAATTGTTCCTGCTGGCAGG CTTCCAAGATACAAGGAAGTGATACTTCTGAATGATTTGATTGACTGTGCTCGACCAGGA GAGGAAATTGAGGTCACTGGGATATACACCAACAATTTTGACTTGTCTTTGAATACAAAG AATGGTTTCCCAGTTTTTGCCACAGTAGTGGAGGCAAACTATGTGGCAAAAAAACAGGAT CTGTTCTCTGCTTACAAATTAACTGATGAGGACAAGGCGGAGATTGAGAAGTTGGCAAAA GATCCACGGATCGGTGAAAGGATTGTCAAATCAATTGCACCATCCATATATGGTCATGAA GATATCAAGACTGCCATTGCACTAGCTATGTTTGGGGGGCAAGAGAAGAATGTCAAGGGA AAGCATCGCTTGAGAGGAGATATCAATGTACTCCTCTTAGGTGATCCAGGCACTGCAAAA TCCCAATTTCTCAAGTATGTTGAGAAAACTGGACACAGAGCAGTGTACACAACTGGAAAA GGAGCTTCTGCTGTTGGACTCACCGCAGCAGTTCACAAGGATCCAGTAACACGGGAATGG ACACTTGAGGGTGGTGCACTAGTGCTTGCTGATAGAGGCATATGCCTTATTGATGAATTT GATAAGATGAACGATCAAGATAGGGTGAGTATTCATGAGGCCATGGAGCAACAAAGTATC AGTATATCAAAGGCCGGAATTGTCACATCCCTTCAAGCTCGGTGCAGTGTTATTGCTGCA GCAAACCCAATAGGAGGAAGATATGATTCATCGAAGACATTCACCCAGAATGTTGAACTG ACGGATCCAATTATTTCACGTTTTGATGTCCTTTGTGTTGTGAAGGACATTGTTGACCCA TTTACAGATGAAATGCTTGCAAGGTTTGTTGTAGATAGTCATGCAAGATCTCAACCCAAG GGTGCTAACCTTGAAGATAGGGTTCCAACTGATGTTGAGGATGATCCATTGGCTGCTGCC AGACAAGCTGACCCAGATATCCTTTCTCAAGACATGCTGAAGAAGTACATAACTTATGCC AAGTTGAACGTGTTTCCCAAAATTCATGATGCTGACCTGGACAAGATTAGCCATGTTTAC GCAGAACTTCGTCGTGAGTCATCTCATGGTCAAGGAGTCCCTATTGCCGTAAGGCATATC GAATCCATTATTCGGATGTCAGAGGCACATGCAAGGATGCATTTGAGGAGCTACGTGTCT CAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGACTCATTTATTTCAACTCAGAAG TTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAAATACATGACCTATAAGAAGGAT TACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGTCAAGGATGTGCTGCACTTCGAA GAAATCGTTTCAGGACCAACGACGCGCCTGACTCACATCGAGGTTAAAGTAGAGGACCTG AAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAGACCGTTCTTCTCCAGCGCCCAC TTCAGGGACAACAACTTCGTCCTCGACGAAGGGCGGGGGATCATCAGGCACCCTCTTGCT GCCTAA

Peptide Sequence

PEP ID	Os11t0484300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:17046950:17052914:1 gene:Os11g0484300 transcript:Os11t0484300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 2 description:Similar to Mcm2-prov protein. (Os11t0484300-01)
Sequence	MDDSENNAPSTPGSPGFSTDRLPPNTTTSRGATDPSSYSDDDDDDVVGAEEAEVDPNVLP EDDGVVAAEEEEDGEDLFNDNYLDDYRRMDEQDQYESVGLDDSIEDERNLDEIMADRRAA EAELDARDVRTGAAPDRKLPRMLHDQDTDEDMSFRRPKRHRANFRPPREPRTPRSDDDGD GATPSSPGRSQRGMYSGGDVPMTDQTDDDPYEDEFDEEDEMNMYRVQGTLREWVTRDEVR RFIAKKFKEFLLTYVNPKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIYIHPNIAIWLA DAPQSVLEVMEEVAKNVVFDLHKNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIG GVVTRRSGVFPQLQQVKFDCSKCGTVLGPFFQNSYTEVKVGSCPECQSKGPFTINVEQTI YRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTK NGFPVFATVVEANYVAKKQDLFSAYKLTDEDKAEIEKLAKDPRIGERIVKSIAPSIYGHE DIKTAIALAMFGGQEKNVKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGK GASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSI SISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDP FTDEMLARFVVDSHARSQPKGANLEDRVPTDVEDDPLAAARQADPDILSQDMLKKYITYA KLNVFPKIHDADLDKISHVYAELRRESSHGQGVPIAVRHIESIIRMSEAHARMHLRSYVS QEDVDMAIRVLLDSFISTQKFGVQKALQKNFRKYMTYKKDYNELLLLLLRTLVKDVLHFE EIVSGPTTRLTHIEVKVEDLKNKAQEYEIYDLRPFFSSAHFRDNNFVLDEGRGIIRHPLA A

Transcript Sequence

Transcript ID	Os11t0484300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:17046950:17052914:1 gene:Os11g0484300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MINI-CHROMOSOME MAINTENANCE PROTEIN 2 description:Similar to Mcm2-prov protein. (Os11t0484300-01)
Sequence	AGCAGCCACTCCTCCCCACCTTACTCCCCCCCGCTTCCACTCCCCCGAACCTTCCAGAAC CTTCTCCCGCTCCCCCGCCGAGATGGATGACTCGGAGAACAACGCGCCGTCGACGCCGGG GTCGCCGGGGTTCAGCACAGACAGGCTGCCGCCGAACACCACCACCAGCCGCGGCGCCAC CGACCCGTCCTCCTACTCGGACGACGACGACGACGACGTGGTTGGCGCGGAGGAGGCGGA GGTCGACCCCAACGTGCTCCCCGAGGACGACGGCGTCGTCGCCGCCGAGGAGGAGGAGGA CGGGGAGGACCTCTTCAACGACAACTACCTCGATGATTACCGGAGGATGGATGAGCAGGA CCAGTATGAATCGGTTGGGTTAGATGACTCGATAGAGGATGAAAGGAACCTGGATGAGAT CATGGCAGATAGAAGGGCTGCTGAAGCAGAACTTGATGCAAGGGATGTGAGGACTGGTGC AGCACCTGATAGGAAATTGCCACGGATGCTACATGATCAAGACACAGATGAGGATATGAG CTTCAGGCGTCCTAAAAGGCACAGAGCTAATTTTAGACCACCAAGGGAACCAAGAACACC AAGAAGTGATGATGACGGTGATGGTGCCACGCCTAGTTCACCTGGAAGATCTCAGCGTGG AATGTATTCTGGAGGGGATGTACCTATGACTGACCAGACTGATGATGATCCATATGAGGA TGAATTTGATGAAGAAGATGAGATGAACATGTACCGTGTACAAGGAACTCTTAGAGAGTG GGTCACAAGAGATGAAGTCCGCCGCTTTATCGCAAAGAAGTTCAAAGAATTCCTTCTAAC ATATGTAAACCCAAAGAATGAACAAGGAGAGTTTGAGTATGTTCGACTAATCAATGAGAT GGTTCTAGCTAACAAATGCAGCTTAGAGATAGATTACAAGCAATTTATTTATATACATCC AAACATTGCTATATGGTTGGCTGATGCACCTCAATCGGTGCTAGAAGTTATGGAGGAAGT TGCCAAAAATGTTGTTTTTGATCTCCATAAGAACTATAGGAACATTCATCAAAAAATCTA TGTCCGAATAACCAATCTTCCTGTCTACGACCAAATACGCAATATCAGGCAAATCCATCT GAACACAATGATTCGAATTGGTGGTGTTGTTACTCGGAGATCAGGTGTTTTTCCTCAGCT ACAACAGGTCAAGTTTGACTGCAGCAAATGTGGGACTGTCCTGGGCCCCTTCTTCCAGAA CTCTTACACTGAAGTCAAGGTTGGATCCTGCCCTGAGTGCCAATCCAAAGGGCCATTCAC CATCAATGTTGAGCAAACCATATATAGGAACTACCAGAAACTCACTCTTCAGGAAAGCCC AGGAATTGTTCCTGCTGGCAGGCTTCCAAGATACAAGGAAGTGATACTTCTGAATGATTT GATTGACTGTGCTCGACCAGGAGAGGAAATTGAGGTCACTGGGATATACACCAACAATTT TGACTTGTCTTTGAATACAAAGAATGGTTTCCCAGTTTTTGCCACAGTAGTGGAGGCAAA CTATGTGGCAAAAAAACAGGATCTGTTCTCTGCTTACAAATTAACTGATGAGGACAAGGC GGAGATTGAGAAGTTGGCAAAAGATCCACGGATCGGTGAAAGGATTGTCAAATCAATTGC ACCATCCATATATGGTCATGAAGATATCAAGACTGCCATTGCACTAGCTATGTTTGGGGG GCAAGAGAAGAATGTCAAGGGAAAGCATCGCTTGAGAGGAGATATCAATGTACTCCTCTT AGGTGATCCAGGCACTGCAAAATCCCAATTTCTCAAGTATGTTGAGAAAACTGGACACAG AGCAGTGTACACAACTGGAAAAGGAGCTTCTGCTGTTGGACTCACCGCAGCAGTTCACAA GGATCCAGTAACACGGGAATGGACACTTGAGGGTGGTGCACTAGTGCTTGCTGATAGAGG CATATGCCTTATTGATGAATTTGATAAGATGAACGATCAAGATAGGGTGAGTATTCATGA GGCCATGGAGCAACAAAGTATCAGTATATCAAAGGCCGGAATTGTCACATCCCTTCAAGC TCGGTGCAGTGTTATTGCTGCAGCAAACCCAATAGGAGGAAGATATGATTCATCGAAGAC ATTCACCCAGAATGTTGAACTGACGGATCCAATTATTTCACGTTTTGATGTCCTTTGTGT TGTGAAGGACATTGTTGACCCATTTACAGATGAAATGCTTGCAAGGTTTGTTGTAGATAG TCATGCAAGATCTCAACCCAAGGGTGCTAACCTTGAAGATAGGGTTCCAACTGATGTTGA GGATGATCCATTGGCTGCTGCCAGACAAGCTGACCCAGATATCCTTTCTCAAGACATGCT GAAGAAGTACATAACTTATGCCAAGTTGAACGTGTTTCCCAAAATTCATGATGCTGACCT GGACAAGATTAGCCATGTTTACGCAGAACTTCGTCGTGAGTCATCTCATGGTCAAGGAGT CCCTATTGCCGTAAGGCATATCGAATCCATTATTCGGATGTCAGAGGCACATGCAAGGAT GCATTTGAGGAGCTACGTGTCTCAGGAAGATGTCGACATGGCTATCCGCGTCCTGCTTGA CTCATTTATTTCAACTCAGAAGTTTGGTGTACAGAAAGCACTTCAAAAGAATTTCAGGAA ATACATGACCTATAAGAAGGATTACAATGAGCTGCTCTTGCTTCTTCTGCGCACCCTGGT CAAGGATGTGCTGCACTTCGAAGAAATCGTTTCAGGACCAACGACGCGCCTGACTCACAT CGAGGTTAAAGTAGAGGACCTGAAGAACAAGGCCCAGGAGTACGAAATCTATGACCTGAG ACCGTTCTTCTCCAGCGCCCACTTCAGGGACAACAACTTCGTCCTCGACGAAGGGCGGGG GATCATCAGGCACCCTCTTGCTGCCTAACTACAGAAGATCATCTGTGACCCATCTGACAA TGAACAATTTGAGCTACCTCATGGGATTATCAGACATAGTGTAATCATCAAATGGCAACT CCTTTGTGCTTTTTAGAGACTGTTGCATGTTATCCAGCTGCATTTGGATAGGGTGTACCG TGTGTACTTTCTTAACATTGTAATTCTGCAAGTATGGTAGAAAATGATAAATCTGTGTCA ATCAATGTATCATTGTTTTGCATTATTGTTTTC