Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0483950-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:17031951:17034202:-1 gene:Os11g0483950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0483950-00)
Sequence	ATGGCCGCCGCCGCCGCCGCCGCCGTGGGCGCCCGCGGCGGCATCCGGCGCCGGCCGAAC CTGTCCCTCCTGGCCGACCGCTGCGCGACCCCGCGCGCGCTCGCCGCCGTCCACGCGGCC ATGCTCGTCTCCGGCCGCCTCGCCGACGACGCCTTCGCGGCGTCCCGCCTCCTCGCCGCC CACGCCGCGCTCTCCCCTCCGGGAGCCGTGCTCCGCCTCCTCGCCTCCCTCCCCTGCGCC CCAAACTCCTTCATGCTCAACATCACGCTCCGCGCCCTCGCCTCCTCCCCCGACCCGGCC TCCGCCCTCCGCTTCTTCTCCCTCCTCCGCCGCGGCAGCGGCGGCGGCGGCGGCTCGTAC TCTCCCGGCAGGCACACCTTCACTTTCCTCCTCAAGGCATCCGCCCGCCTCCCCCTCCGC GCCTCCGAGCAGCTCCACGCGCTCGCCGTCAGGCACGGGCTGGAGCGCGACGCCTACGTC GCCAACGGCCTCGTCCGGGCGTACTCGCTCGCGGGCCTCGTCCCCCTCGCGCGCAGGGTG TTCGACGGATTGCCCGAGCGGAGCGCGGTGGTGTGCACCACCATGGTGTCCGGGTACGCG CAAAACGGGATGCACGAGGACGCCATGCGGTCGTTCGAGGAGATGGTCGGCGACGGGATC GAGCCCCACGGCGCAGCGCTGGCGTCCGTGCTGTCGTCGTGCGCGCGGTCGGGGTCGCGC GGGCTCGAGATGGGGCGGCGCGTGCACGAGCTCATGGAGTCGAGGCGGGTGACGGCGCCC GTGGTGGGGGCCATCCTCGGGACGGCGCTGGTCGACATGTACGCCAAGACCGGCGCCATG GAGGAGGCGACGGCGGTGTTTGACCGGATGCCCGAGCGGCAAACGGCGACGTGGAACGCC CTGATCACCGGGCTGGCGCACCACGGCCACGGCGAGGTCGCCCTTGCTACGTTCCACCGG ATGAGGCGGGACGGCGTGCCGCCGAACGGTGCCACGCTCGTCGGCGTCCTGTCGGCCTAC GGCTGCACGGGGCGTCTCGACGAGGCCCGCCGCGTGTTCGCGTCCATGGAGAAGGACTTC GCGGTGGCGCCGACCATCCAGCACTACGGCTGCATGGTCGACCTCCTCGGCCGGAGCGGC CTCCTCACGGAAGCCGAGGAGATGATCCGTGGCATGACGACCTGCGACGCCGACACGGTG ATCTGGGGAGCCCTGCTGAACGCCTGCAAGAACCACGGCGACATCGACGTCGCCGAGAGG GCGGTGCAGGAGATGCTCAAGCTGGATCCCGGCAACCATGGCGTCTACGTGGTGCTCTCC AACATGTACGCCGAGGCCGGGAGGTGGCAGGACGTGGACAGGCTGAGGAAGGTGATGAAG CGGGCGCGGCTTTCCAAGATCCCCGGCTCCAGCACGGTGGCCGGCGACGACAGCTGA

Peptide Sequence

PEP ID	Os11t0483950-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:17031951:17034202:-1 gene:Os11g0483950 transcript:Os11t0483950-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0483950-00)
Sequence	MAAAAAAAVGARGGIRRRPNLSLLADRCATPRALAAVHAAMLVSGRLADDAFAASRLLAA HAALSPPGAVLRLLASLPCAPNSFMLNITLRALASSPDPASALRFFSLLRRGSGGGGGSY SPGRHTFTFLLKASARLPLRASEQLHALAVRHGLERDAYVANGLVRAYSLAGLVPLARRV FDGLPERSAVVCTTMVSGYAQNGMHEDAMRSFEEMVGDGIEPHGAALASVLSSCARSGSR GLEMGRRVHELMESRRVTAPVVGAILGTALVDMYAKTGAMEEATAVFDRMPERQTATWNA LITGLAHHGHGEVALATFHRMRRDGVPPNGATLVGVLSAYGCTGRLDEARRVFASMEKDF AVAPTIQHYGCMVDLLGRSGLLTEAEEMIRGMTTCDADTVIWGALLNACKNHGDIDVAER AVQEMLKLDPGNHGVYVVLSNMYAEAGRWQDVDRLRKVMKRARLSKIPGSSTVAGDDS

Transcript Sequence

Transcript ID	Os11t0483950-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:17031951:17034202:-1 gene:Os11g0483950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0483950-00)
Sequence	GCACGCGACGCCAATGGCCGCCGCCGCCGCCGCCGCCGTGGGCGCCCGCGGCGGCATCCG GCGCCGGCCGAACCTGTCCCTCCTGGCCGACCGCTGCGCGACCCCGCGCGCGCTCGCCGC CGTCCACGCGGCCATGCTCGTCTCCGGCCGCCTCGCCGACGACGCCTTCGCGGCGTCCCG CCTCCTCGCCGCCCACGCCGCGCTCTCCCCTCCGGGAGCCGTGCTCCGCCTCCTCGCCTC CCTCCCCTGCGCCCCAAACTCCTTCATGCTCAACATCACGCTCCGCGCCCTCGCCTCCTC CCCCGACCCGGCCTCCGCCCTCCGCTTCTTCTCCCTCCTCCGCCGCGGCAGCGGCGGCGG CGGCGGCTCGTACTCTCCCGGCAGGCACACCTTCACTTTCCTCCTCAAGGCATCCGCCCG CCTCCCCCTCCGCGCCTCCGAGCAGCTCCACGCGCTCGCCGTCAGGCACGGGCTGGAGCG CGACGCCTACGTCGCCAACGGCCTCGTCCGGGCGTACTCGCTCGCGGGCCTCGTCCCCCT CGCGCGCAGGGTGTTCGACGGATTGCCCGAGCGGAGCGCGGTGGTGTGCACCACCATGGT GTCCGGGTACGCGCAAAACGGGATGCACGAGGACGCCATGCGGTCGTTCGAGGAGATGGT CGGCGACGGGATCGAGCCCCACGGCGCAGCGCTGGCGTCCGTGCTGTCGTCGTGCGCGCG GTCGGGGTCGCGCGGGCTCGAGATGGGGCGGCGCGTGCACGAGCTCATGGAGTCGAGGCG GGTGACGGCGCCCGTGGTGGGGGCCATCCTCGGGACGGCGCTGGTCGACATGTACGCCAA GACCGGCGCCATGGAGGAGGCGACGGCGGTGTTTGACCGGATGCCCGAGCGGCAAACGGC GACGTGGAACGCCCTGATCACCGGGCTGGCGCACCACGGCCACGGCGAGGTCGCCCTTGC TACGTTCCACCGGATGAGGCGGGACGGCGTGCCGCCGAACGGTGCCACGCTCGTCGGCGT CCTGTCGGCCTACGGCTGCACGGGGCGTCTCGACGAGGCCCGCCGCGTGTTCGCGTCCAT GGAGAAGGACTTCGCGGTGGCGCCGACCATCCAGCACTACGGCTGCATGGTCGACCTCCT CGGCCGGAGCGGCCTCCTCACGGAAGCCGAGGAGATGATCCGTGGCATGACGACCTGCGA CGCCGACACGGTGATCTGGGGAGCCCTGCTGAACGCCTGCAAGAACCACGGCGACATCGA CGTCGCCGAGAGGGCGGTGCAGGAGATGCTCAAGCTGGATCCCGGCAACCATGGCGTCTA CGTGGTGCTCTCCAACATGTACGCCGAGGCCGGGAGGTGGCAGGACGTGGACAGGCTGAG GAAGGTGATGAAGCGGGCGCGGCTTTCCAAGATCCCCGGCTCCAGCACGGTGGCCGGCGA CGACAGCTGACGTCGGCATTGGAAGAATAAACGACAATTTCATAGCATGTCAGAACTGAT CAGCATTTGGCAATTTCATAGTAGCTGATTTTCTGTTCATGAACAGAGGATTGTTGACAA GGCTGACATCATATCGGAAAAGTTTGACAAGTTAAATTAACACCAGCTTTGACATTGGAT GCTAGCAATTCTAATTCATTGTGGTGATGCCCAGATGAGTTGTTTACAGTGGGACAAGTT CAGCATGACAATAGGAGGCCATTGCTCTACATGCCATCAAAAATTCCCTTCCCTGGAATC AACAAAAGGGAGGGGGCTATACACTCAGAGGTCAGAACCATTGACTCAATCATGATTGTT CAACCAGTATGGCCACTACTAGCAGAGCAGGCTGTATGACGGCATGTCTTCGATCCGCAT CACATCATCCAGCAGAAGCTCCCTCTCCAGCTGTGTCCGTGTCGACTTCAGTATCTCCTG AATCACAACAGAATCGCAAGATCGGTCAAAACAATGCAATCTGATGAGTTACGGAGAAAA TATGGCATGTACATTGACAGGAAAATTACATTGAAGTCCATGTAGGAGGCGTTCTTGTCG AGCCACTGCTTGTCCATAACAACGAACGCGACGCAGTAGAGGAGATCAAATGCCCACTCA TCCTCTGGGGGAACAAAGCAAGGACAAATTCGTTTCAAAATGTTGGTAT