Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0482500-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:16950295:16953804:-1 gene:Os11g0482500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-02)
Sequence	ATGCCGCGCCCCTCCACCTCCGCCTCCGCCACCGCCTCCCGCTTCGCCGCCTTCTGGGCC GCCGACGCGCTCGCCGGCGACGACGCCCTCGACTTCGCCGTCACCAAGGCGATGGTGGGC GTCTCCCCGGATTCCGTCAGGGCCGCCCCTGAGGCGGTGCGGGAGCGCGTGGCGCTGCGG TGCCTCCAGGAGGTCGTCTCCCTCGCCTCCTCCGATGGCGAGCGCGGCGCCACGGCCTCG GCCATAGCGGCGCCGGGGGAGGGGATGCTTGGGGTGGAGGACGCATCCCGCACCTGCGAG GATTTGCTGCTTCAACTCATCCGGGAGGTTGGTAGCTCAGGGAGCTTGGAGAAGGATATG CTTCCGCCCTTTAGACAAGATATCCAGAAGTTTATATGCATAAAGAGACCTACATTACCA GAAACTTCTTTTGAGTTGCTCAGAAAAGTTTACCCAGAGATTACACCTGTGGTTCCACCA TCCCCAGTGGAGCAGAATGGAAATGACCAACACGACAATATCAGCCATGATCTTGTGAAT ACAGAGAAGACCGGATTCACTACAGATGGTGCTCAACTTCAGCAGGATGATCTAGCAAAT TTAGTCGATGAAAGAAACACAGAAAATCTTCAGAAGGATGCAATGGCAACTTCTGATTTT CAACAACCATGTACATCAGACAATAGGTGTTTTGATCAGCGACAAGAAGATTCTATTAAT ACTGTTGGTGTCAACATCAGGTCTCCAGAAGACAGTCCAACTAATGTAAATAGACACATG TCAGTTGCAGCTGAGCCTTCTTTAGCTAGTTCTGCAGATTTGCTGGGAAGTAATACAGGA AGAATGTCTGAGCAGGACACGATAGATCATACAACCATAGTTCAATCACAATCTTGTGGG GTCAGATATCCTAATAAACATCACAGTAATAATGGAGACATGCCACTTGTTGCCAGCATT CAGTCACCAAAGGATTCCATCCATGAAGGATCAACCATGCAGACAACTGTTTCTCCAGCT GTTGACAGAAGCAATGATGCTTTACCGGCATCCAACATGACCCACTTGCCTGAGTTTATT GCTGTAGAGGATAAAATAATGACTTCAGAACCACACTTCAGCAAAACTCATCCAAATTCA GGGCAACATGATACTGGTGATAAAGCAAATCAAGATGTGGGTTGTGGCAGTACTGGTATT CAGACAGCTGCTGCTTTACCATCTGAAGGCTTTAATGGGGATGTTCAAGGAGACAAATCT GAAATTAAAGATCCAGCAGGGAATACTACACAGCATACTGAAACTTTTGAACAAGAAAAT AGTGACAAGGCTCATTTGGAAGTTGGTTGTTCCGACAAAGTTAATCAAGCTCTATATGAT GATGGCAACATCATAAAAAATAATATGGTCTTTGGTGGGCTGAATAAGCAAACTGCTCTA GAGTCTCATGGCTGCAGCATGACCTTGCATAACAGAAATTCAGAGGCCAACCATTTCTCT GAGCAGAATATTGGAAGGAACAGAACTGAAGTTCAGAATGATTGCTGCAGTATTCCAACC TCTCCTAATGATGTTAATGACAAGCGAGCAAAGCAAGCTTCAAACAAGGAAACCATGGCG AATACTGTGGCAGAAACATTGCATGTGCATTCTTCAGATGGTAGTTTCAGTGGCTTCGCA GCTGGTGGTCTTCTGTCAATGGCTGAAAAACTACCGTTCTGTACTCAGGATCAATATGCT AATGGTACTGTTGAGGGCTTGTCAGAACAAGAGTTGTGCATAAAATGTGGCAAAGATGGT CAGTTGCTGAAATGCAGTGGCTGTTTTTTAGCCGTTCATGATACATGTTTTGGCTCATCA GTGACATTTGATGATTCTGGTCAGTTCTACTGTCCTGTATGCTTCTATACTAAAGCAACT GAAGCATATCAAAAGGCAAAGAAAACATATTCTGAAGCAAGGAAGAACCTATCAGCTTTC CTTGGTAGAAAGCAATTGGCTGAGCAATATCAACAAGCTGCAGTGCGGCAAAGAGCTGCC AACAGTGAGGATCATTTCAATGGGTGTAACAACGCAATCAAAAGGCAAGGTAATCATCAA TCTGAAGGAAATAACCTTTCTCATAGGGATGAAGAGCCTGCCCGACAGAGGAAGAAGCAG AAGACAAATGCTAGGGATGCTTGCACTCAGGAAGTAGTCACTAAAAAGGCACCCACTGTT CATAACTCTGATGTTGTATCCATG

Peptide Sequence

PEP ID	Os11t0482500-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:16950295:16953804:-1 gene:Os11g0482500 transcript:Os11t0482500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-02)
Sequence	MPRPSTSASATASRFAAFWAADALAGDDALDFAVTKAMVGVSPDSVRAAPEAVRERVALR CLQEVVSLASSDGERGATASAIAAPGEGMLGVEDASRTCEDLLLQLIREVGSSGSLEKDM LPPFRQDIQKFICIKRPTLPETSFELLRKVYPEITPVVPPSPVEQNGNDQHDNISHDLVN TEKTGFTTDGAQLQQDDLANLVDERNTENLQKDAMATSDFQQPCTSDNRCFDQRQEDSIN TVGVNIRSPEDSPTNVNRHMSVAAEPSLASSADLLGSNTGRMSEQDTIDHTTIVQSQSCG VRYPNKHHSNNGDMPLVASIQSPKDSIHEGSTMQTTVSPAVDRSNDALPASNMTHLPEFI AVEDKIMTSEPHFSKTHPNSGQHDTGDKANQDVGCGSTGIQTAAALPSEGFNGDVQGDKS EIKDPAGNTTQHTETFEQENSDKAHLEVGCSDKVNQALYDDGNIIKNNMVFGGLNKQTAL ESHGCSMTLHNRNSEANHFSEQNIGRNRTEVQNDCCSIPTSPNDVNDKRAKQASNKETMA NTVAETLHVHSSDGSFSGFAAGGLLSMAEKLPFCTQDQYANGTVEGLSEQELCIKCGKDG QLLKCSGCFLAVHDTCFGSSVTFDDSGQFYCPVCFYTKATEAYQKAKKTYSEARKNLSAF LGRKQLAEQYQQAAVRQRAANSEDHFNGCNNAIKRQGNHQSEGNNLSHRDEEPARQRKKQ KTNARDACTQEVVTKKAPTVHNSDVVSM

Transcript Sequence

Transcript ID	Os11t0482500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:16950295:16953804:-1 gene:Os11g0482500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0482500-02)
Sequence	ACTCGCATCCCGGCCCATCCGCCTCGTCAGCGGCGGCGCACCACCATCCCCACCCCCACC CTCCTCGCCGGCGTCTTCACCAGGCGCTCCGCCTCCACGTCGGCCACCTCGTCGGCGTCC GGTTGCTCCACCCGCCCACCAAACTCGCCGCCCACCACCCCCACCACCGCGTAACCGCAA ATGCCGCGCCCCTCCACCTCCGCCTCCGCCACCGCCTCCCGCTTCGCCGCCTTCTGGGCC GCCGACGCGCTCGCCGGCGACGACGCCCTCGACTTCGCCGTCACCAAGGCGATGGTGGGC GTCTCCCCGGATTCCGTCAGGGCCGCCCCTGAGGCGGTGCGGGAGCGCGTGGCGCTGCGG TGCCTCCAGGAGGTCGTCTCCCTCGCCTCCTCCGATGGCGAGCGCGGCGCCACGGCCTCG GCCATAGCGGCGCCGGGGGAGGGGATGCTTGGGGTGGAGGACGCATCCCGCACCTGCGAG GATTTGCTGCTTCAACTCATCCGGGAGGTTGGTAGCTCAGGGAGCTTGGAGAAGGATATG CTTCCGCCCTTTAGACAAGATATCCAGAAGTTTATATGCATAAAGAGACCTACATTACCA GAAACTTCTTTTGAGTTGCTCAGAAAAGTTTACCCAGAGATTACACCTGTGGTTCCACCA TCCCCAGTGGAGCAGAATGGAAATGACCAACACGACAATATCAGCCATGATCTTGTGAAT ACAGAGAAGACCGGATTCACTACAGATGGTGCTCAACTTCAGCAGGATGATCTAGCAAAT TTAGTCGATGAAAGAAACACAGAAAATCTTCAGAAGGATGCAATGGCAACTTCTGATTTT CAACAACCATGTACATCAGACAATAGGTGTTTTGATCAGCGACAAGAAGATTCTATTAAT ACTGTTGGTGTCAACATCAGGTCTCCAGAAGACAGTCCAACTAATGTAAATAGACACATG TCAGTTGCAGCTGAGCCTTCTTTAGCTAGTTCTGCAGATTTGCTGGGAAGTAATACAGGA AGAATGTCTGAGCAGGACACGATAGATCATACAACCATAGTTCAATCACAATCTTGTGGG GTCAGATATCCTAATAAACATCACAGTAATAATGGAGACATGCCACTTGTTGCCAGCATT CAGTCACCAAAGGATTCCATCCATGAAGGATCAACCATGCAGACAACTGTTTCTCCAGCT GTTGACAGAAGCAATGATGCTTTACCGGCATCCAACATGACCCACTTGCCTGAGTTTATT GCTGTAGAGGATAAAATAATGACTTCAGAACCACACTTCAGCAAAACTCATCCAAATTCA GGGCAACATGATACTGGTGATAAAGCAAATCAAGATGTGGGTTGTGGCAGTACTGGTATT CAGACAGCTGCTGCTTTACCATCTGAAGGCTTTAATGGGGATGTTCAAGGAGACAAATCT GAAATTAAAGATCCAGCAGGGAATACTACACAGCATACTGAAACTTTTGAACAAGAAAAT AGTGACAAGGCTCATTTGGAAGTTGGTTGTTCCGACAAAGTTAATCAAGCTCTATATGAT GATGGCAACATCATAAAAAATAATATGGTCTTTGGTGGGCTGAATAAGCAAACTGCTCTA GAGTCTCATGGCTGCAGCATGACCTTGCATAACAGAAATTCAGAGGCCAACCATTTCTCT GAGCAGAATATTGGAAGGAACAGAACTGAAGTTCAGAATGATTGCTGCAGTATTCCAACC TCTCCTAATGATGTTAATGACAAGCGAGCAAAGCAAGCTTCAAACAAGGAAACCATGGCG AATACTGTGGCAGAAACATTGCATGTGCATTCTTCAGATGGTAGTTTCAGTGGCTTCGCA GCTGGTGGTCTTCTGTCAATGGCTGAAAAACTACCGTTCTGTACTCAGGATCAATATGCT AATGGTACTGTTGAGGGCTTGTCAGAACAAGAGTTGTGCATAAAATGTGGCAAAGATGGT CAGTTGCTGAAATGCAGTGGCTGTTTTTTAGCCGTTCATGATACATGTTTTGGCTCATCA GTGACATTTGATGATTCTGGTCAGTTCTACTGTCCTGTATGCTTCTATACTAAAGCAACT GAAGCATATCAAAAGGCAAAGAAAACATATTCTGAAGCAAGGAAGAACCTATCAGCTTTC CTTGGTAGAAAGCAATTGGCTGAGCAATATCAACAAGCTGCAGTGCGGCAAAGAGCTGCC AACAGTGAGGATCATTTCAATGGGTGTAACAACGCAATCAAAAGGCAAGGTAATCATCAA TCTGAAGGAAATAACCTTTCTCATAGGGATGAAGAGCCTGCCCGACAGAGGAAGAAGCAG AAGACAAATGCTAGGGATGCTTGCACTCAGGAAGTAGTCACTAAAAAGGCACCCACTGTT CATAACTCTGATGTTGTATCCATG