Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0482000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:16917810:16919756:-1 gene:Os11g0482000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S5. (Os11t0482000-01)
Sequence	ATGGCCGAAGTGGAGCTCCCGCAGCAGGAGGTCAAGCTCTTCAGCCGCTGGTCCTTCGAG GACGTCCAGGTGAACGACATCTCGCTGGCGGACTACCTGGCGGTGAACCCGACGAAGCAC GCGACGTACCTGCCGCACACGGCGGGGAGGTACTCGGCGAAGAGGTTCCGGAAGGCGCAG TGCCCCATCGTGGAGCGCCTGACCAACTCGCTCATGATGCACGGCCGCAACAACGGGAAG AAGATCATGGCCGTGCGCATCGTCAAGCACGCCATGGAGATCATCCACCTCCTCACCGAC GCCAACCCCATTCAGGTCATCGTCGACGCCATCATCAACAGTGGCCCTCGTGAGGATGCG ACCCGTATTGGGTCTGCGGGTGCTGTGAGGAGGCAGGCTGTGGATATCTCTCCCTTGAGG AGGGTCAACCAGGCAATCTACCTCCTCACCACTGGTGCCAGGGAGAGCGCCTTCAGGAAC ATCAAGACCATTGCTGAGTGCCTTGCTGACGAGCTTATTAATGCCGCCAAGGGCTCATCC AACAGCTATGCCATCAAGAAGAAGGATGAGATCGAGCGTGTTGCCAAGGCCAACCGTTGA

Peptide Sequence

PEP ID	Os11t0482000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:16917810:16919756:-1 gene:Os11g0482000 transcript:Os11t0482000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S5. (Os11t0482000-01)
Sequence	MAEVELPQQEVKLFSRWSFEDVQVNDISLADYLAVNPTKHATYLPHTAGRYSAKRFRKAQ CPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDA TRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSS NSYAIKKKDEIERVAKANR

Transcript Sequence

Transcript ID	Os11t0482000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:16917810:16919756:-1 gene:Os11g0482000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S5. (Os11t0482000-01)
Sequence	ATCCCTAGCTCCCCCACTCTCGTTTAGGGTTTCCCTCCGCCGCCGCCGCCTCCCGCATCC ACGCGCCTCCTCCTCCTCCGCCGCCGCCGCCGCCACCGCAGCATCAGCCATGGCCGAAGT GGAGCTCCCGCAGCAGGAGGTCAAGCTCTTCAGCCGCTGGTCCTTCGAGGACGTCCAGGT GAACGACATCTCGCTGGCGGACTACCTGGCGGTGAACCCGACGAAGCACGCGACGTACCT GCCGCACACGGCGGGGAGGTACTCGGCGAAGAGGTTCCGGAAGGCGCAGTGCCCCATCGT GGAGCGCCTGACCAACTCGCTCATGATGCACGGCCGCAACAACGGGAAGAAGATCATGGC CGTGCGCATCGTCAAGCACGCCATGGAGATCATCCACCTCCTCACCGACGCCAACCCCAT TCAGGTCATCGTCGACGCCATCATCAACAGTGGCCCTCGTGAGGATGCGACCCGTATTGG GTCTGCGGGTGCTGTGAGGAGGCAGGCTGTGGATATCTCTCCCTTGAGGAGGGTCAACCA GGCAATCTACCTCCTCACCACTGGTGCCAGGGAGAGCGCCTTCAGGAACATCAAGACCAT TGCTGAGTGCCTTGCTGACGAGCTTATTAATGCCGCCAAGGGCTCATCCAACAGCTATGC CATCAAGAAGAAGGATGAGATCGAGCGTGTTGCCAAGGCCAACCGTTGAGTGGTGATCCC ATGTCATTGTGCTAAAGCTCTTGCGCTGTTTGGCAGGACTATACTTTTTGCTAGTAATTT AAGCCTTTTCAGACCTACCTGTGGTTTAATGTTTGAATGAACATCACTAGTGCTGAGAAA AATATGTAGTGCTCTATTCTATCTATCTATCGACATGGTTTTAT