Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0481200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:16866331:16872004:-1 gene:Os11g0481200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os11t0481200-01)
Sequence	ATGCGCAGGGGCGGCCACGCCGAGGCGTTGCTGCTGCGGCGGCGGCGCGGGCCGGCGAGG CTGTGGGTCGCGGTGCTGGCGCTGCTCGCCGGCACCCTCTGGCTCTTCTCCTCCTCCTCC TCCGCTGGCCTCGGCCTCGGCCTCGCCCGCTCCTCCTACGGACTCCAGGATGTTGATGTA AATAAGTTGTGGAGAACTGCAGATTCAAATGGTTGGAGGGCATCTTCTGCACCGCGCACC TATTGGCCTCAGTCTGAGTCAAATGGTTACTTACGTGTCCGGTGCAATGGTGGCTTGAAC CAACAACGTAGTGCGATATGTAATGCTGTTGTTGCTGCACGAATAATGAATGCTACACTA GTGCTGCCAGAGCTGGACACAAATTCTTTCTGGCATGATGAGAGTGGTTTTTTAGGTATT TATGATGTGCTCCACTTCATCAAGACATTAAAGTATGATGTTCGAATTGCTATGGTCATT CCAGAAATTACTACAAATGGAAAGACCAAGAAGCTGAAAGCCCATCAGATTCGACCGCCT CGAGATGCACCAGTTACGTGGTATACAACAGTTGCTTTGGAGAAGATGAAGAAGTATGGA GCTATATATTTAACCCCATTTTCACACCGCCTGGCAGAAGACATTGATGATCCAGAGCTC CAGAGATTGAGATGCAGGGTGAATTACCATGCACTACGATTCAAGCCTCACATAATGAAA ACAAGCAGTGAGATAGTCAATAAGCTCCGTACAGAAGGCCATTTCATGTCAATTCACCTT CGATTTGAGATGGATATGCTTGCATTTGCTGGGTGCATTGATATATTCACACCTCAAGAA CAGAAAATTCTGATCAAGTACCGCAAGGAACATTTTGCAGAAAAGGAACTTATTTATAGG GAAAGAAGGCTCATCGGGAAGTGCCCTTTAACTCCAGAAGAGGTAGGTCTTATTCTTCGA TCCATGGGATTTGACAATAAAACAAGAATCTACCTTGCTTCTGGCGATCTCTTTGGTGGG AAACGATTCATGAAGCCATTTAAGGCTATGTTTCCACGCTTAGAAAACCACAGCACTGTT GGTCCTGGAAAGCTGGAAGAAAATACAAGAGGGCTCGCGGGTTCTGCAGTGGATTACATG GTCTGTCTCCTGTCAGACATTTTTATTCCTACATATGATGGCCCGAGCAACTTTGCAAAC AACCTAATGGGCCACCGCCTATACTATGGTTTCCGGACAACAATCACACCAAACAGGAAG GCCCTAGCTCCCATATTCATGGACAGGGAGGAAGGTCGCGCCGCTCGCTTTGAGGAGCGA GTCAGGCAGGTTATGTTCAACACATATTTTGGTGGCCCCCACAAGCGTGTCCATCCAGAA TCTTTCTACACAAACTCATGGCCTGAGTGCTTCTGCCAACCGAATCCAAGGAACCGTGCA GACAAATGCCCTCCGGACAACATATATGAGGTTCTGGAGAGCCAATTTCAGAGTGTAGAG GGTGAAGAAGATATCGAAGAAGTGAAATCCACTAATCAGACTGACTCAACGAGCCAAATA GAAGAATTAGTGGTCTAA

Peptide Sequence

PEP ID	Os11t0481200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:16866331:16872004:-1 gene:Os11g0481200 transcript:Os11t0481200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os11t0481200-01)
Sequence	MRRGGHAEALLLRRRRGPARLWVAVLALLAGTLWLFSSSSSAGLGLGLARSSYGLQDVDV NKLWRTADSNGWRASSAPRTYWPQSESNGYLRVRCNGGLNQQRSAICNAVVAARIMNATL VLPELDTNSFWHDESGFLGIYDVLHFIKTLKYDVRIAMVIPEITTNGKTKKLKAHQIRPP RDAPVTWYTTVALEKMKKYGAIYLTPFSHRLAEDIDDPELQRLRCRVNYHALRFKPHIMK TSSEIVNKLRTEGHFMSIHLRFEMDMLAFAGCIDIFTPQEQKILIKYRKEHFAEKELIYR ERRLIGKCPLTPEEVGLILRSMGFDNKTRIYLASGDLFGGKRFMKPFKAMFPRLENHSTV GPGKLEENTRGLAGSAVDYMVCLLSDIFIPTYDGPSNFANNLMGHRLYYGFRTTITPNRK ALAPIFMDREEGRAARFEERVRQVMFNTYFGGPHKRVHPESFYTNSWPECFCQPNPRNRA DKCPPDNIYEVLESQFQSVEGEEDIEEVKSTNQTDSTSQIEELVV

Transcript Sequence

Transcript ID	Os11t0481200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:16866331:16872004:-1 gene:Os11g0481200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os11t0481200-01)
Sequence	CCCAGATCTGATCGCCTCTTCTCGCGACTCCCCCCCAATGCGCAGGGGCGGCCACGCCGA GGCGTTGCTGCTGCGGCGGCGGCGCGGGCCGGCGAGGCTGTGGGTCGCGGTGCTGGCGCT GCTCGCCGGCACCCTCTGGCTCTTCTCCTCCTCCTCCTCCGCTGGCCTCGGCCTCGGCCT CGCCCGCTCCTCCTACGGACTCCAGGATGTTGATGTAAATAAGTTGTGGAGAACTGCAGA TTCAAATGGTTGGAGGGCATCTTCTGCACCGCGCACCTATTGGCCTCAGTCTGAGTCAAA TGGTTACTTACGTGTCCGGTGCAATGGTGGCTTGAACCAACAACGTAGTGCGATATGTAA TGCTGTTGTTGCTGCACGAATAATGAATGCTACACTAGTGCTGCCAGAGCTGGACACAAA TTCTTTCTGGCATGATGAGAGTGGTTTTTTAGGTATTTATGATGTGCTCCACTTCATCAA GACATTAAAGTATGATGTTCGAATTGCTATGGTCATTCCAGAAATTACTACAAATGGAAA GACCAAGAAGCTGAAAGCCCATCAGATTCGACCGCCTCGAGATGCACCAGTTACGTGGTA TACAACAGTTGCTTTGGAGAAGATGAAGAAGTATGGAGCTATATATTTAACCCCATTTTC ACACCGCCTGGCAGAAGACATTGATGATCCAGAGCTCCAGAGATTGAGATGCAGGGTGAA TTACCATGCACTACGATTCAAGCCTCACATAATGAAAACAAGCAGTGAGATAGTCAATAA GCTCCGTACAGAAGGCCATTTCATGTCAATTCACCTTCGATTTGAGATGGATATGCTTGC ATTTGCTGGGTGCATTGATATATTCACACCTCAAGAACAGAAAATTCTGATCAAGTACCG CAAGGAACATTTTGCAGAAAAGGAACTTATTTATAGGGAAAGAAGGCTCATCGGGAAGTG CCCTTTAACTCCAGAAGAGGTAGGTCTTATTCTTCGATCCATGGGATTTGACAATAAAAC AAGAATCTACCTTGCTTCTGGCGATCTCTTTGGTGGGAAACGATTCATGAAGCCATTTAA GGCTATGTTTCCACGCTTAGAAAACCACAGCACTGTTGGTCCTGGAAAGCTGGAAGAAAA TACAAGAGGGCTCGCGGGTTCTGCAGTGGATTACATGGTCTGTCTCCTGTCAGACATTTT TATTCCTACATATGATGGCCCGAGCAACTTTGCAAACAACCTAATGGGCCACCGCCTATA CTATGGTTTCCGGACAACAATCACACCAAACAGGAAGGCCCTAGCTCCCATATTCATGGA CAGGGAGGAAGGTCGCGCCGCTCGCTTTGAGGAGCGAGTCAGGCAGGTTATGTTCAACAC ATATTTTGGTGGCCCCCACAAGCGTGTCCATCCAGAATCTTTCTACACAAACTCATGGCC TGAGTGCTTCTGCCAACCGAATCCAAGGAACCGTGCAGACAAATGCCCTCCGGACAACAT ATATGAGGTTCTGGAGAGCCAATTTCAGAGTGTAGAGGGTGAAGAAGATATCGAAGAAGT GAAATCCACTAATCAGACTGACTCAACGAGCCAAATAGAAGAATTAGTGGTCTAATTGAG TTGGCTAACTGCGATTGTATGAGAACACCATGTTGGATCATTCATTGACCACCGCATACT GGTGGTATGGCATTTTCAGTTGAAAGGATGAATCTGATGGTGTAATGCTGAGTGTTGAAA GCTTGGTCACCACAGGCAAGACACGATTCTGTCTAACTGGAACTGTTAAGAGAGGCTAGA ATTAGGAGAGCAGTGAACCACATTTTGGCTAGATTGGTCAACTAGGAATTTCAGAGGGAA AACCATACACGTTCTGTCTATATTAGCTATTCATTTGTTAAAGATTTGAGTGCGGCATGT GGTGTGTAAGTATGATGAGGCTACATTGACTGGAATCCTTAATACAGGATATATTGCCTT TATACGGGATATATATTGCAGCTG