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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0479000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:16743419:16744480:1 gene:Os11g0479000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0479000-01)
Sequence

ATGGCCACTCCTCTCAACCTTCTCATTGCTCTCCTCTTCATCGTCGTCTCCGTTCAAGGG
ACAAATGGGGCCGATCGCTGCGCCGCGTCGAGCAGCATCGATGTGCAGACCATCAACACC
GGCGAGGCCGCGGCCGGCGGCGGCGACACGGTGTTCGAGGTGCAGGTGAAGAACCTGTGC
GGCTGCAGCGTCAGGGACGTCCGGCTCGACGGCGGCGGCTTCGCGACGACGGTGGAGGTC
GACCCGGCCGTGTTCCGCGCCGCCGACGACGGCGGCGACTACTACCTGGTGAACGGCGGC
GGGCCGATCGCCAGCATGGCCACCGTCAGCTTCCGCTACACCTGGGACCACTTCTTCCAG
ATCACTCCCCGGAGCATGGAGGAAGATCAGTGCTAG

Peptide Sequence

PEP ID

Os11t0479000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:16743419:16744480:1 gene:Os11g0479000 transcript:Os11t0479000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0479000-01)
Sequence

MATPLNLLIALLFIVVSVQGTNGADRCAASSSIDVQTINTGEAAAGGGDTVFEVQVKNLC
GCSVRDVRLDGGGFATTVEVDPAVFRAADDGGDYYLVNGGGPIASMATVSFRYTWDHFFQ
ITPRSMEEDQC

Transcript Sequence

Transcript ID

Os11t0479000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:16743419:16744480:1 gene:Os11g0479000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0479000-01)
Sequence

ATATATGGCCACTCCTCTCAACCTTCTCATTGCTCTCCTCTTCATCGTCGTCTCCGTTCA
AGGGACAAATGGGGCCGATCGCTGCGCCGCGTCGAGCAGCATCGATGTGCAGACCATCAA
CACCGGCGAGGCCGCGGCCGGCGGCGGCGACACGGTGTTCGAGGTGCAGGTGAAGAACCT
GTGCGGCTGCAGCGTCAGGGACGTCCGGCTCGACGGCGGCGGCTTCGCGACGACGGTGGA
GGTCGACCCGGCCGTGTTCCGCGCCGCCGACGACGGCGGCGACTACTACCTGGTGAACGG
CGGCGGGCCGATCGCCAGCATGGCCACCGTCAGCTTCCGCTACACCTGGGACCACTTCTT
CCAGATCACTCCCCGGAGCATGGAGGAAGATCAGTGCTAGCTATAGCTAGCTACATACAC
TTGGGTACATATGCAAAGTTGGAGGGAATAATATTCTTGCGTGAGCTAATACACATGTGT
TGCAGTGTTAGCTAGTACTATATATACTAATGTTCCATGAAAAGCTAGGTCAAGTGTGGA
AGAATTATTCCTGCATGGGTTTATATATGTGTAGTACAGTGGTCTAATGTGTACTGAGTG
AGGGATCGAATATTACAAAAAAAGTTTAGCTCAATAATGTATACGGTCTTTTGCATCTCA
ATAAATGGT