Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0473000-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:16305737:16309493:1 gene:Os11g0473000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-01);Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-02)
Sequence	ATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGCTCCTC CTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGCTATAT GCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGTATAAC ACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGAGGCGG CATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACTTCTTA GTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAGAGGTT ATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGTTGCTA CAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTGCATAC CGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCGTTCAT TGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCTACTAT TACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGA

Peptide Sequence

PEP ID	Os11t0473000-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:16305737:16309493:1 gene:Os11g0473000 transcript:Os11t0473000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-01);Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-02)
Sequence	MNAFRLAGDMTHLLSVVVLLLKIHTIKSCAGISLKTQELYALVFAARYLDLFIHFISLYN TVMKLVFLASSFSIVWYMRRHKIVRRTYDKDHDTFRHHFLVLPCLALALLINERFTFREV MWAFSIYLEAVAILPQLVLLQRTRNIDNLTGQYVFFLGAYRVLYILNWIYRYFTEPHFVH WISWVAGIVQTLLYADFFYYYIMSWKNNVKLELPA

Transcript Sequence

Transcript ID	Os11t0473000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:16305737:16309493:1 gene:Os11g0473000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-01);Similar to ER lumen protein retaining receptor (HDEL receptor) (PGP169-12). (Os11t0473000-02)
Sequence	CTCCGTCTCCATCCAACGCCGACGACTCGAGCCTCGACGGCGACGACCCCACACCGGCGG CGGAGATGAACGCGTTCCGGCTAGCCGGGGACATGACCCACCTCCTCAGCGTGGTGGTGC TCCTCCTGAAGATCCACACCATCAAGTCCTGCGCAGGCATATCTCTAAAGACCCAGGAGC TATATGCACTTGTGTTTGCTGCTCGTTACTTGGACCTGTTCATTCATTTTATATCTCTGT ATAACACTGTCATGAAGTTGGTCTTTCTGGCAAGTTCTTTCTCAATAGTTTGGTACATGA GGCGGCATAAGATTGTCCGAAGAACCTATGACAAGGATCATGACACCTTTCGTCATCACT TCTTAGTGTTGCCATGTTTGGCTCTGGCCCTCCTTATTAATGAGAGGTTTACTTTTAGAG AGGTTATGTGGGCATTCTCCATATATTTAGAAGCTGTAGCAATTCTACCTCAACTTGTGT TGCTACAGCGCACGAGGAATATTGACAACCTGACTGGCCAATATGTCTTCTTTCTAGGTG CATACCGTGTGCTGTATATCCTTAACTGGATCTACCGATACTTCACTGAGCCCCATTTCG TTCATTGGATAAGCTGGGTTGCGGGCATCGTGCAGACTCTCTTGTATGCTGACTTCTTCT ACTATTACATAATGAGCTGGAAGAACAATGTGAAGCTGGAGCTACCAGCCTGAGCTCATT TTTCATCCAAGATAGGCTAGGTAAAACTTGTTAAATAGATAGAAAGGCATGATACACCAA GGCCACTGCTCCTGGTTATGATATATGCATCTTGGTTTCCTGCTCTATCCTCTTGTTTAT TTCTTTTCCTATTTGTCGGATGAGAGGAAATCCAAGGGTCACCTTGTATCTTGTAAGACA ATTAAGCACAGAGAGATGAGTACCAGGACGTTCTGAGTTATGATAGGTTTTGAGACACAA TGGAAATGCTATCTTTTAGTGTACAACGTGGTATGATCCTTCAGCTTGGAAGAATAAAGT ATTCTGTGTTCTGTCTTCATTTTCATAGAAACTGGAGGCTATGCGCAGGGTGTTAATTGC