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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0472600-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:16281677:16282722:1 gene:Os11g0472600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P21-Rho-binding domain containing protein. (Os11t0472600-00)
Sequence

ATGACACCGATCTCCGAGCAGCAGCCCAGCAGCAAGGAGGTGCAAGGAGGACAGGCTGCT
GCTGAAACGAGTTATTTCAGATCAGCTCCAGTTCTTCCTGCAGGCGCGATGCAGGACGAG
GAATCGACATTCGGGAAGGCGAAGAGCGCGGACCAGGAGGAGAGGCAGCAGGCGGCGAGG
CGCGACTTCCTCGCGGGGATCCGGAAGCTCATCAAGAGCTTCAAGAGCCTGTCCCACATC
TTCGAGGTGTACAAGGAGGACGACGAGGACGAGGACGAGGACAGCATGAACATAGAGATC
GGGTTCCCCACGGACGTGCAGCATGTGGCACACATCGGCCTGGACGGGTCCAGCAGCATG
TCGAGCCTGAGGGGCCTGCAGGAGGAGGCCAGGGAGCTGCTCTCCATGTCCAGCCTCACC
ATGGAGCAGTTCGAGTTCGCCATGGCCTCACTGGCTGCTCACAAGGACCCCAAAATGGTG
GTAGATAGAGTTGCCCCCAATTAG

Peptide Sequence

PEP ID

Os11t0472600-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:16281677:16282722:1 gene:Os11g0472600 transcript:Os11t0472600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P21-Rho-binding domain containing protein. (Os11t0472600-00)
Sequence

MTPISEQQPSSKEVQGGQAAAETSYFRSAPVLPAGAMQDEESTFGKAKSADQEERQQAAR
RDFLAGIRKLIKSFKSLSHIFEVYKEDDEDEDEDSMNIEIGFPTDVQHVAHIGLDGSSSM
SSLRGLQEEARELLSMSSLTMEQFEFAMASLAAHKDPKMVVDRVAPN

Transcript Sequence

Transcript ID

Os11t0472600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:16281677:16282722:1 gene:Os11g0472600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to P21-Rho-binding domain containing protein. (Os11t0472600-00)
Sequence

AAACGAAGGCAGGCCAGGCACCACCATTCTGCAGTTGCGTCCATCTCTCACAGCTCTCTC
TCTCTCTTTCCCTGAGCATTTTCTAGTGTGTTTCTGGCAACGATGACACCGATCTCCGAG
CAGCAGCCCAGCAGCAAGGAGGTGCAAGGAGGACAGGCTGCTGCTGAAACGAGTTATTTC
AGATCAGCTCCAGTTCTTCCTGCAGGCGCGATGCAGGACGAGGAATCGACATTCGGGAAG
GCGAAGAGCGCGGACCAGGAGGAGAGGCAGCAGGCGGCGAGGCGCGACTTCCTCGCGGGG
ATCCGGAAGCTCATCAAGAGCTTCAAGAGCCTGTCCCACATCTTCGAGGTGTACAAGGAG
GACGACGAGGACGAGGACGAGGACAGCATGAACATAGAGATCGGGTTCCCCACGGACGTG
CAGCATGTGGCACACATCGGCCTGGACGGGTCCAGCAGCATGTCGAGCCTGAGGGGCCTG
CAGGAGGAGGCCAGGGAGCTGCTCTCCATGTCCAGCCTCACCATGGAGCAGTTCGAGTTC
GCCATGGCCTCACTGGCTGCTCACAAGGACCCCAAAATGGTGGTAGATAGAGTTGCCCCC
AATTAGTTTACTAGGATGCCATAATATATATAGTTTATGCTTGTGATCATGGGTTAATTT
GTGCTGTAATTCTCTTGCGTACTCTTTTTTTTTTGTATTTTGATGCTCTTATTTTTGTTC
TCTTTAATTTGTTCATGCCCTGTGCTACTTTGTATGGAGTTCAGAATTTTGCTTGATTCG
TG