Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0472500-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:16275479:16279579:1 gene:Os11g0472500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-02)
Sequence	ATGGATCCGAACCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTG GCGGTCGCCGAGGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCA GGGGGGTTCTTGCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCC CTCGATGAGGTCGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTA GTCAGCGAGATTGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCC AAGTCAATCGTTCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACT GGACTTGGTAGGATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACA GTTTTGTACTTGTTCTTTGGACTACGTTTGTTATACATTGCTTGGAAGTCTGACCCAAAG GGATCTCAGAAGAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAA TCAACCCTTCGCCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATC TTAACCTTCTTAGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACC CACAAGAATGCAATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCA CTTGCAGTCATAGGTGGGAGCATGTTGGCATCCAAGATTTCACAACGGACAGTTGCAACA ATCGGAGGTGTTCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGA

Peptide Sequence

PEP ID	Os11t0472500-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:16275479:16279579:1 gene:Os11g0472500 transcript:Os11t0472500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-02)
Sequence	MDPNPRLLILLVLLAFSATVAVAEDGESTGGSKVSLGRRAGGFLHGLKKEAVVEGDHGVA LDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLST GLGRIVPNLISRKHTNSAATVLYLFFGLRLLYIAWKSDPKGSQKKEMEEVEEKLESGQGK STLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTS LAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL

Transcript Sequence

Transcript ID	Os11t0472500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:16275479:16279579:1 gene:Os11g0472500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-01);Uncharacterised protein family UPF0016 domain containing protein. (Os11t0472500-02)
Sequence	ACCCTCCCCCAAATCCGCGAGCCTCTAGGGTTCGTGGGATCCCCCGGAAATGGATCCGAA CCCTAGACTTCTCATCCTACTCGTCCTCCTCGCGTTCTCCGCCACCGTGGCGGTCGCCGA GGACGGCGAATCGACGGGGGGATCGAAGGTCTCGCTGGGGCGCCGTGCAGGGGGGTTCTT GCACGGGCTGAAGAAGGAAGCAGTGGTGGAGGGAGACCATGGGGTGGCCCTCGATGAGGT CGGCCCCGGGCTGTTCGATGCGCTCTTCGCGAGTCTCTCGATGATCTTAGTCAGCGAGAT TGGAGATGAAACCTTTATTATTGCGGCGCTAATGGCAATGCGGCACCCCAAGTCAATCGT TCTGTCTGGTGCGCTATCGGCGCTCTACGTGATGACGGTACTATCAACTGGACTTGGTAG GATAGTCCCCAACTTGATATCAAGGAAGCACACTAACAGTGCTGCTACAGTTTTGTACTT GTTCTTTGGACTACGTTTGTTATACATTGCTTGGAAGTCTGACCCAAAGGGATCTCAGAA GAAGGAAATGGAAGAAGTGGAAGAGAAGCTTGAGTCAGGTCAAGGAAAATCAACCCTTCG CCGGTTCTTTGGAAGATTTTGTACACCGATCTTTTTGGAGGCTTTTATCTTAACCTTCTT AGCTGAATGGGGCGACCGAAGCCAAATAGCAACTATTGCGCTTGCAACCCACAAGAATGC AATCGGAGTAGCAGTTGGAGCATCATTGGGCCACACTGTCTGCACATCACTTGCAGTCAT AGGTGGGAGCATGTTGGCATCCAAGATTTCACAACGGACAGTTGCAACAATCGGAGGTGT TCTCTTCTTGGGGTTCTCCGTGTCATCGTACTTCTATCCCCCACTATGATTAACAGCATT AACAGCTCCTTACTCTTTCTTGATACCCTTTGGTCACCCTGCTCCCTGTGTTGAGCAAAT GAGTAGAGGAATTAAATTGATTCTTTGGGCACCTCTACGCTACGATTCGCAATTCATGTA TAGCCCTTGCAAATGAAATTGTTCCTGACCATGCTACTTCACTTCAGTCTATAGCAGAAG CCGTCTCGATG