Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0465200-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:15956675:15960376:-1 gene:Os11g0465200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bx2-like protein. (Os11t0465200-01);Similar to Cytochrome P450 family protein, expressed. (Os11t0465200-02)
Sequence	ATGGATGAGATGGCTGCACGAACATGGTTGTGGTTGCTACTGTCCCCTCTCATCCTCCTA CTGCTGCACTATGCTCTGGCCCTGCTAACTGCACGCCGAGCGAGGAAGAACCCCTTGCCA CCTTCACCTCCAGCCTTGCCATTCATCGGGCACCTCCACCTCATCGGCGCCCTCCCTCAC GTCTCCCTCTGCTGCCTCGCCACGAAGCATGCGCCCGACCTCATGTTCCTCCGACTTGGC ACGTCGTTGCCGGTGCTCGTCGCTTCCTCGCCCTGTGCCGCCGAGGCCATCCTGCGCACG CATGACGACGTGTTCGCGTCGCGGCCACGCACCGTTCTAGCGGATATCATCTTCTACGGC TCGCGCGACATTGGCTTCGCACCGTATGGCGAGGATTGGCGGCAGGCAAGGAAGCTTGTG AACACGCACCTGCTGAGTGTCAACAAGGTGCAGTCGCTATGGCTTGCCCGTGAGGAGGAG GTGAAAATTGTGATGGAGAAGATAAGCAAAGCGGCATTCGCACGTGAAGCAGTGGATATA GGCCAGATTCTTTGCTCATTCACAAACGATCTCGCATGCCGTGTTGTGTCAAGGAAGTTA GTCGGGGATGACAGGCAGAAAAAGCTCCTCCAAGAGTTGGTTAATAAGACAATAAAGCTG CTTTCTATCTTCAACGTGGAGGAGTACTTTTCAATTTTAGCTCGGATTGGCGTGATTGGG AAGGTGATGTGCGCAAGAGCTGAGAGGTTGAAAAAGAAGTGGGACATGCTGCTGAAAAAG CTGATCGCCGACCATGAGAGCAAGTGCGATTCATACTTAGTATGTGGCCGTAACAAAGAT GACTTTGTGGACATTTTACTGTCTGTTAGGAAGGAGTATGGTCTCACCGAAGAACATGTC AAAGCTATTCTTGAGGACGTCTTTATTGCGGGAACACAGTCGTCTGCTCGGGTGATCGAA TTCACCTTTGCTGAGCTCATGCGGAAGCCACACATGCTCAAGAAGGTGCAGGATGAGGTG AGGGCTTGCATTCCCAATGGACAAGCAATTGTTAGTGAAGTTCAAGTTAACAACATGACT TACCTGAGAGCAGTTGTGAAGGAGGTACTAAGGCTGCACCCTGTGGCACCACTCCTTGCG ACACACGTCTCCATGGCTGACTGCAACATCAATGGGTATATGATCCCTTCAGGGATGCGT GTCTTGGTCAACGCCTGGGCCATTGGTAGGGACGAACGCTTCTGGTATGATCCAGAGAAG TTCATGCCAGAAAGGTTTGTTGAAAGTGTGAATGGTTCTGCCACTGCGTCAGTCAACTTT TGGGTGAATAACTATCAATACTTGCCATTTGGTTCTGGAAGGAGAATGTGCCTCGGGATG AACTTTGCCATGGCAGTTATCGAGATCACACTAGCGAACCTTCTCTGGAAATTTGATTGG GCGCTGCCTGCACATGCAATGGAGGTTGATATGTCAGAAGAGTTTGGGTTGTCGGTGCGT CTGAAAGAAAAGCTATTGTTGGTTCCAAAGCAACATGTGTAG

Peptide Sequence

PEP ID	Os11t0465200-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:15956675:15960376:-1 gene:Os11g0465200 transcript:Os11t0465200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bx2-like protein. (Os11t0465200-01);Similar to Cytochrome P450 family protein, expressed. (Os11t0465200-02)
Sequence	MDEMAARTWLWLLLSPLILLLLHYALALLTARRARKNPLPPSPPALPFIGHLHLIGALPH VSLCCLATKHAPDLMFLRLGTSLPVLVASSPCAAEAILRTHDDVFASRPRTVLADIIFYG SRDIGFAPYGEDWRQARKLVNTHLLSVNKVQSLWLAREEEVKIVMEKISKAAFAREAVDI GQILCSFTNDLACRVVSRKLVGDDRQKKLLQELVNKTIKLLSIFNVEEYFSILARIGVIG KVMCARAERLKKKWDMLLKKLIADHESKCDSYLVCGRNKDDFVDILLSVRKEYGLTEEHV KAILEDVFIAGTQSSARVIEFTFAELMRKPHMLKKVQDEVRACIPNGQAIVSEVQVNNMT YLRAVVKEVLRLHPVAPLLATHVSMADCNINGYMIPSGMRVLVNAWAIGRDERFWYDPEK FMPERFVESVNGSATASVNFWVNNYQYLPFGSGRRMCLGMNFAMAVIEITLANLLWKFDW ALPAHAMEVDMSEEFGLSVRLKEKLLLVPKQHV

Transcript Sequence

Transcript ID	Os11t0465200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:15956675:15960376:-1 gene:Os11g0465200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Bx2-like protein. (Os11t0465200-01);Similar to Cytochrome P450 family protein, expressed. (Os11t0465200-02)
Sequence	GCCTAGAACTTGCATCCCTGAACTGTTCTACAATATAGATCTCATGGATGAGATGGCTGC ACGAACATGGTTGTGGTTGCTACTGTCCCCTCTCATCCTCCTACTGCTGCACTATGCTCT GGCCCTGCTAACTGCACGCCGAGCGAGGAAGAACCCCTTGCCACCTTCACCTCCAGCCTT GCCATTCATCGGGCACCTCCACCTCATCGGCGCCCTCCCTCACGTCTCCCTCTGCTGCCT CGCCACGAAGCATGCGCCCGACCTCATGTTCCTCCGACTTGGCACGTCGTTGCCGGTGCT CGTCGCTTCCTCGCCCTGTGCCGCCGAGGCCATCCTGCGCACGCATGACGACGTGTTCGC GTCGCGGCCACGCACCGTTCTAGCGGATATCATCTTCTACGGCTCGCGCGACATTGGCTT CGCACCGTATGGCGAGGATTGGCGGCAGGCAAGGAAGCTTGTGAACACGCACCTGCTGAG TGTCAACAAGGTGCAGTCGCTATGGCTTGCCCGTGAGGAGGAGGTGAAAATTGTGATGGA GAAGATAAGCAAAGCGGCATTCGCACGTGAAGCAGTGGATATAGGCCAGATTCTTTGCTC ATTCACAAACGATCTCGCATGCCGTGTTGTGTCAAGGAAGTTAGTCGGGGATGACAGGCA GAAAAAGCTCCTCCAAGAGTTGGTTAATAAGACAATAAAGCTGCTTTCTATCTTCAACGT GGAGGAGTACTTTTCAATTTTAGCTCGGATTGGCGTGATTGGGAAGGTGATGTGCGCAAG AGCTGAGAGGTTGAAAAAGAAGTGGGACATGCTGCTGAAAAAGCTGATCGCCGACCATGA GAGCAAGTGCGATTCATACTTAGTATGTGGCCGTAACAAAGATGACTTTGTGGACATTTT ACTGTCTGTTAGGAAGGAGTATGGTCTCACCGAAGAACATGTCAAAGCTATTCTTGAGGA CGTCTTTATTGCGGGAACACAGTCGTCTGCTCGGGTGATCGAATTCACCTTTGCTGAGCT CATGCGGAAGCCACACATGCTCAAGAAGGTGCAGGATGAGGTGAGGGCTTGCATTCCCAA TGGACAAGCAATTGTTAGTGAAGTTCAAGTTAACAACATGACTTACCTGAGAGCAGTTGT GAAGGAGGTACTAAGGCTGCACCCTGTGGCACCACTCCTTGCGACACACGTCTCCATGGC TGACTGCAACATCAATGGGTATATGATCCCTTCAGGGATGCGTGTCTTGGTCAACGCCTG GGCCATTGGTAGGGACGAACGCTTCTGGTATGATCCAGAGAAGTTCATGCCAGAAAGGTT TGTTGAAAGTGTGAATGGTTCTGCCACTGCGTCAGTCAACTTTTGGGTGAATAACTATCA ATACTTGCCATTTGGTTCTGGAAGGAGAATGTGCCTCGGGATGAACTTTGCCATGGCAGT TATCGAGATCACACTAGCGAACCTTCTCTGGAAATTTGATTGGGCGCTGCCTGCACATGC AATGGAGGTTGATATGTCAGAAGAGTTTGGGTTGTCGGTGCGTCTGAAAGAAAAGCTATT GTTGGTTCCAAAGCAACATGTGTAGCTGCTAGCAAGTACTCGAAGGAATTGAATTGTCCA ACTTTAATGTGAGAAAGTCTACCATGACCTATGGGGGTCTACACTAATGTTAACCTCTGG ACAAAGTCATTATACACCGTTTCTCTATGCTTCAACCCTTGGAGGATCCAATTCTTATCA CAAAATATGTGTGTAACAAGTAATAATTTTTGCATGGT