Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0463700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:15851159:15852070:-1 gene:Os11g0463700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Penicillin-binding protein, transpeptidase fold domain containing protein. (Os11t0463700-01)
Sequence

ATGGCATCCTCCTCCTCACCTCCACTCCTCCTCCTCGTCTCCCTCCTCGCCGCCGTCGCC
GCCGCCTTCCTCGCGGCGCAAGCTCTCGCCCAACACCAACCCCAAGGAAATGATACGGCG
GCGGCGGGGGAGGGGTGGAGGCCGAGGCTGAGGAAGACGTACGTGGAGGGCGGCGCCGCC
GGGATGGTGCCGCGGCGGCGGAGGCTGGTGGGGAGGTTCCAGATATGCGCGGTGTGCACC
TGCTGCGGGGGCCCGCACGGGGTGTGCATCCCGGCGCCCTGCTGCTACGCCATCAACTGC
AACATCCCGAACCGCCCCTTCGGCGTCTGCTCCTTCACCCCGCGAACCTGCAACTGCCTC
AACTGCCACCTCTAG

Peptide Sequence

PEP ID

Os11t0463700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:15851159:15852070:-1 gene:Os11g0463700 transcript:Os11t0463700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Penicillin-binding protein, transpeptidase fold domain containing protein. (Os11t0463700-01)
Sequence

MASSSSPPLLLLVSLLAAVAAAFLAAQALAQHQPQGNDTAAAGEGWRPRLRKTYVEGGAA
GMVPRRRRLVGRFQICAVCTCCGGPHGVCIPAPCCYAINCNIPNRPFGVCSFTPRTCNCL
NCHL

Transcript Sequence

Transcript ID

Os11t0463700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:15851159:15852070:-1 gene:Os11g0463700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Penicillin-binding protein, transpeptidase fold domain containing protein. (Os11t0463700-01)
Sequence

CTCTCTTCTCTTCAGCACACTCCCACTGTGGGAGTCCCACAAAACCCCCCCTCCTCTCCT
CCTCTGGCTCCCTCTGCCACCCAGCCACCACAGGATGGCATCCTCCTCCTCACCTCCACT
CCTCCTCCTCGTCTCCCTCCTCGCCGCCGTCGCCGCCGCCTTCCTCGCGGCGCAAGCTCT
CGCCCAACACCAACCCCAAGGAAATGATACGGCGGCGGCGGGGGAGGGGTGGAGGCCGAG
GCTGAGGAAGACGTACGTGGAGGGCGGCGCCGCCGGGATGGTGCCGCGGCGGCGGAGGCT
GGTGGGGAGGTTCCAGATATGCGCGGTGTGCACCTGCTGCGGGGGCCCGCACGGGGTGTG
CATCCCGGCGCCCTGCTGCTACGCCATCAACTGCAACATCCCGAACCGCCCCTTCGGCGT
CTGCTCCTTCACCCCGCGAACCTGCAACTGCCTCAACTGCCACCTCTAGCAGATATGCAG
CACAGCACATCAGCCAAGAAAATCAGGCAAGAAACCCCAAGTAAAAGAAAAAAAACAGTA
ATGCTTAATGCTGCTTTTAATCTCTTTGTTTTTTTTTCTCTTTTTGATTTTTCTTTGGTT
GGTGCCAAATCGAGAAATGCTAAGAAGAAATTTGTTTGGGATTGGAAGAACACTTGGATC
ATATAGTTAGTAGTTGTAGTGAGTGGAAATATTGGTAGCTATGAGTAGCTTTGTGATGGA
TGGATGGATGGATGTTTTTTGGTTAGTTTTTTTTTCCCCATTTTGGGGGGTGACTGGTTA
ATGTGGTGCCTATTGAATTGTGGATATAATTAATTAGTATCTTGG