Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0463600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:15840376:15844396:1 gene:Os11g0463600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0463600-01)
Sequence

AAGCTCGACTCCCAGGACCTCCTTCAGATGGGGGACGCCCAGTTCTACTTCCTCCTCCCC
ACCCGCTCCGTCTTCGCCACCGACGCCGCGCGCCGCGCCTCCGCCGCCGCCCGGCGCGCT
GTCCCGCCGCCTCCCTCCTCCTCCTCCGACGGCGATGATGGGGAGGAAGAACGCGAAGCG
GCGGTGGCTAAGCGGCCGAGGAACGGAGACGCCGGGTCTCTCGCTGGAAGGAAGTCTGAG
AAGGGATCAAAAGGTTACAGACAATCAGATAACCTACAACTCTTGCAGTTGGAAGAGAAA
GATGTTATCTCATCAACAGCTACTGTCTTATCTGATCTCTGTGGACCTCAGGAATGGGTG
CCTATGGACAGGCTTCATGAAGTGATGTTTGAGAAATATGGCGACTTGTGGCACCACAAC
AGGGTGCGGAAATATTTGACATCAGAAGACTGGCCCAAGAGCGAAACTGATGGTAGACCG
TGGCACGGGCTCTCTCTGCTGCTAAGGAAGTACCCTGAGCATTTTGTGATAAACATAAGA
ATGTCAGGGGGGCGGAGCATTGAGTTTGTCTCTCTGGTTTCGCTGCAACCCTGA

Peptide Sequence

PEP ID

Os11t0463600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:15840376:15844396:1 gene:Os11g0463600 transcript:Os11t0463600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0463600-01)
Sequence

KLDSQDLLQMGDAQFYFLLPTRSVFATDAARRASAAARRAVPPPPSSSSDGDDGEEEREA
AVAKRPRNGDAGSLAGRKSEKGSKGYRQSDNLQLLQLEEKDVISSTATVLSDLCGPQEWV
PMDRLHEVMFEKYGDLWHHNRVRKYLTSEDWPKSETDGRPWHGLSLLLRKYPEHFVINIR
MSGGRSIEFVSLVSLQP

Transcript Sequence

Transcript ID

Os11t0463600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:15840376:15844396:1 gene:Os11g0463600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to FHA domain containing protein, expressed. (Os11t0463600-01)
Sequence

CAAGCTCGACTCCCAGGACCTCCTTCAGATGGGGGACGCCCAGTTCTACTTCCTCCTCCC
CACCCGCTCCGTCTTCGCCACCGACGCCGCGCGCCGCGCCTCCGCCGCCGCCCGGCGCGC
TGTCCCGCCGCCTCCCTCCTCCTCCTCCGACGGCGATGATGGGGAGGAAGAACGCGAAGC
GGCGGTGGCTAAGCGGCCGAGGAACGGAGACGCCGGGTCTCTCGCTGGAAGGAAGTCTGA
GAAGGGATCAAAAGGTTACAGACAATCAGATAACCTACAACTCTTGCAGTTGGAAGAGAA
AGATGTTATCTCATCAACAGCTACTGTCTTATCTGATCTCTGTGGACCTCAGGAATGGGT
GCCTATGGACAGGCTTCATGAAGTGATGTTTGAGAAATATGGCGACTTGTGGCACCACAA
CAGGGTGCGGAAATATTTGACATCAGAAGACTGGCCCAAGAGCGAAACTGATGGTAGACC
GTGGCACGGGCTCTCTCTGCTGCTAAGGAAGTACCCTGAGCATTTTGTGATAAACATAAG
AATGTCAGGGGGGCGGAGCATTGAGTTTGTCTCTCTGGTTTCGCTGCAACCCTGACTAGT
TCGTAGTGAGTCGCATCCTGTGTGGGACAAGCTTTGGAGCGTATGTTTCGCTGCTCTTGT
AAACAGCAAAACTGAAGTTAGCAACAGGGTAGGAAAGAATCCTACAAAGGTTTTGTTTTT
GTTTTCTCGGCGGTTAAATTGGTAGATACATAGAGTGTAGGGCAATTTTACCTGTGCATT
ATCAGAGTGCGAAAGTTTACCTTTC