Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0458100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:15531495:15532837:-1 gene:Os11g0458100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0458100-01)
Sequence

GATGGTGGAGCTTACACTGAAAAATGCGAAGTTGAAGAAATTGCTTCTGTTGCAGAGTCT
GGCATGCACCAAGAAGAACAAGTATTCAAGGATGTGAAAGAATGCGTGCAATCTGAAGCT
GAAACCTGCACTGAGAAATGCAGCAAGGACCAGCAATCTGAAGAAAGCGTAGTGGTGGTT
CAGTCTGAAGAAGAATGGCAAGAAGAGAACCTCAAAATTGTTCTTCCTGAGCCAGAAATG
CAAGATCAGGAGTACAAAGATGTGGAACCTGTCAAAGAATTGCAGGATCAGGAGTACAAA
TTTCTGCAACCTGAAGAAGAAGAAGAACAGCAAGAACAAGATTCTGAAAATGATGCACAA
CCTGAAGAACAGTTACAAGAGCAAGATTGTGACAATGGCGTGCAACCTGAAGAAGAAGAA
GAATCGCAGGAGCACGAGATGCGACTGCAAGAATCGCACGATGATCAGGAGGAGGAGTTC
AAGGACGCGGCGGACCAAGAATCTCCAAGGGAGGATCCCCTCCGGCCGTCGACGTCGATC
GCGCGGCGGGTGCACTCGCGGACGTCGTCGGAGCACCTCCTCGTCGTCGGCGAGGGGTCG
CCGCGGAAGGAGAAGGAGTGGAAGCGGACGTTGGCGTGCAAGCTCTACGAGGAACGGATG
CAGCTCAAGCTCCGCCGCGACCGCGCCGTCGTCGAGTCGTCCAGCGACAACATGGACATG
CTCTGGGAGGCCTACGAGGTCGGCGGCGGCGGCGGCGGCGCCACCTCCACCAAGGGCGGC
GCCAGCAAGGCGAAACGCAAGCAAGAACGAGCCACCGTCGAACGCAAGCAAGAACACGCG
ACCGCCGACGAGGAAGACGACGACGACGACGGCGACGAGGAGGAAGGCTCGGTGAGGCAG
CTCTGCTGCCTCCAGGCTCTCAAGTTCTCGACGAGGAAGATGAGCTTCGGCGGCGGCGGC
GGCAAGCCGAGCCTGGCCAAGATCTCCAAGGTGCTGAGGAGGGTGGCCGCGTTGTCGAGG
TCCGGATCGCGGCGAAGCACCAAAGGTTGA

Peptide Sequence

PEP ID

Os11t0458100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:15531495:15532837:-1 gene:Os11g0458100 transcript:Os11t0458100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0458100-01)
Sequence

DGGAYTEKCEVEEIASVAESGMHQEEQVFKDVKECVQSEAETCTEKCSKDQQSEESVVVV
QSEEEWQEENLKIVLPEPEMQDQEYKDVEPVKELQDQEYKFLQPEEEEEQQEQDSENDAQ
PEEQLQEQDCDNGVQPEEEEESQEHEMRLQESHDDQEEEFKDAADQESPREDPLRPSTSI
ARRVHSRTSSEHLLVVGEGSPRKEKEWKRTLACKLYEERMQLKLRRDRAVVESSSDNMDM
LWEAYEVGGGGGGATSTKGGASKAKRKQERATVERKQEHATADEEDDDDDGDEEEGSVRQ
LCCLQALKFSTRKMSFGGGGGKPSLAKISKVLRRVAALSRSGSRRSTKG

Transcript Sequence

Transcript ID

Os11t0458100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:15531495:15532837:-1 gene:Os11g0458100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0458100-01)
Sequence

TGGATGGTGGAGCTTACACTGAAAAATGCGAAGTTGAAGAAATTGCTTCTGTTGCAGAGT
CTGGCATGCACCAAGAAGAACAAGTATTCAAGGATGTGAAAGAATGCGTGCAATCTGAAG
CTGAAACCTGCACTGAGAAATGCAGCAAGGACCAGCAATCTGAAGAAAGCGTAGTGGTGG
TTCAGTCTGAAGAAGAATGGCAAGAAGAGAACCTCAAAATTGTTCTTCCTGAGCCAGAAA
TGCAAGATCAGGAGTACAAAGATGTGGAACCTGTCAAAGAATTGCAGGATCAGGAGTACA
AATTTCTGCAACCTGAAGAAGAAGAAGAACAGCAAGAACAAGATTCTGAAAATGATGCAC
AACCTGAAGAACAGTTACAAGAGCAAGATTGTGACAATGGCGTGCAACCTGAAGAAGAAG
AAGAATCGCAGGAGCACGAGATGCGACTGCAAGAATCGCACGATGATCAGGAGGAGGAGT
TCAAGGACGCGGCGGACCAAGAATCTCCAAGGGAGGATCCCCTCCGGCCGTCGACGTCGA
TCGCGCGGCGGGTGCACTCGCGGACGTCGTCGGAGCACCTCCTCGTCGTCGGCGAGGGGT
CGCCGCGGAAGGAGAAGGAGTGGAAGCGGACGTTGGCGTGCAAGCTCTACGAGGAACGGA
TGCAGCTCAAGCTCCGCCGCGACCGCGCCGTCGTCGAGTCGTCCAGCGACAACATGGACA
TGCTCTGGGAGGCCTACGAGGTCGGCGGCGGCGGCGGCGGCGCCACCTCCACCAAGGGCG
GCGCCAGCAAGGCGAAACGCAAGCAAGAACGAGCCACCGTCGAACGCAAGCAAGAACACG
CGACCGCCGACGAGGAAGACGACGACGACGACGGCGACGAGGAGGAAGGCTCGGTGAGGC
AGCTCTGCTGCCTCCAGGCTCTCAAGTTCTCGACGAGGAAGATGAGCTTCGGCGGCGGCG
GCGGCAAGCCGAGCCTGGCCAAGATCTCCAAGGTGCTGAGGAGGGTGGCCGCGTTGTCGA
GGTCCGGATCGCGGCGAAGCACCAAAGGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAACA
CCAGCAATGGCGATGAATCCATCCAATCCACCATGGACTCAATGCGTTGCATCAACCAGC
AATGGATTGCTCACTGTATTTGTGCTCCTTTTTAATTGCTCGAATTTTTCTTCTTTTTCT
TTTTCTTTTTCTTTTTCTTTTTTGAAGTTTGTGTAGATATATGATATATGTGTACCCAAT
GGTTTCAGAGAGATTGGGTCTGGTAATTACAGGGCTGTCACTCTGGCATGCTCAATGTAA
TAAAGCTTAATTGGGTGTGTGTT