Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0456300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:15459465:15462337:1 gene:Os11g0456300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN, Oryza sativa SKP1-like gene 1, rice SKP1-like Protein1 description:Similar to SKP1-like protein 1A. (Os11t0456300-01);Similar to SKP1-like protein 1A. (Os11t0456300-02)
Sequence	ATGGCGGCTGAGGGAGAGAAGAAGATGATCACCCTGAAGAGCTCCGACGGGGAGGAGTTC GAGGTGGAGGAGGCGGTGGCGATGGAGTCGCAGACGATCCGCCACATGATCGAGGACGAC TGCGCCGACAACGGCATCCCGCTCCCCAACGTCAACTCCAAGATCCTCTCCAAGGTCATC GAGTACTGCAACAAGCACGTGCACGCCGCGGCCGCCGCGGCCTCCAAGGCCGCCGACGAC GCCGCGTCCGCCGCCGCAGCCGTGCCGCCGCCCTCCGGCGAGGACCTCAAGAACTGGGAC GCCGACTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCCGCGAACTAC CTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGACATGATCAAGGGG AAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACCCCTGAGGAG GAAGAGGAGATCCGCAGGGAGAACCAGTGGGCTTTTGAGTAG

Peptide Sequence

PEP ID	Os11t0456300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:15459465:15462337:1 gene:Os11g0456300 transcript:Os11t0456300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN, Oryza sativa SKP1-like gene 1, rice SKP1-like Protein1 description:Similar to SKP1-like protein 1A. (Os11t0456300-01);Similar to SKP1-like protein 1A. (Os11t0456300-02)
Sequence	MAAEGEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVI EYCNKHVHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANY LNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE

Transcript Sequence

Transcript ID	Os11t0456300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:15459465:15462337:1 gene:Os11g0456300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN, Oryza sativa SKP1-like gene 1, rice SKP1-like Protein1 description:Similar to SKP1-like protein 1A. (Os11t0456300-01);Similar to SKP1-like protein 1A. (Os11t0456300-02)
Sequence	ATCCAACCCCCAATCTCGCCGCAATCCCCATCGCCGCCGCTGCGAAAGCTAGGGTTTCGT GCGATTCACCTCCTCGGCGACGACCGAGACCGCGAGCGATTTCGGAGGGCTCGATCGATG GCGGCTGAGGGAGAGAAGAAGATGATCACCCTGAAGAGCTCCGACGGGGAGGAGTTCGAG GTGGAGGAGGCGGTGGCGATGGAGTCGCAGACGATCCGCCACATGATCGAGGACGACTGC GCCGACAACGGCATCCCGCTCCCCAACGTCAACTCCAAGATCCTCTCCAAGGTCATCGAG TACTGCAACAAGCACGTGCACGCCGCGGCCGCCGCGGCCTCCAAGGCCGCCGACGACGCC GCGTCCGCCGCCGCAGCCGTGCCGCCGCCCTCCGGCGAGGACCTCAAGAACTGGGACGCC GACTTCGTCAAGGTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCCGCGAACTACCTC AACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGACATGATCAAGGGGAAG ACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACGACTTCACCCCTGAGGAGGAA GAGGAGATCCGCAGGGAGAACCAGTGGGCTTTTGAGTAGAAGGCATCAAGGCCTCTGATG TCTTGGTGCTTAGATCCTTACTCCGTATCTACGTATGCTCTGCTTTTATATGTCGTGCTG GTTGTAAGTATTTTGGAGTCCGATGGGGGTTCATGTGCACGTTTAGTTGGTTAAATGGTT AAGTTCTATCCAGGAAAAAAAGAACTGATGTGGTCAGAACTACTGAACCTGTTATCTGCA TTAATTAATACTATCAATCTGCAGT