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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0456000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:15445157:15445843:-1 gene:Os11g0456000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 33 description:Similar to RALF. (Os11t0456000-01)
Sequence

ATGCCACCACCATCAATCACCACCACCACCACCAAGCTGTTCTTGCTCCTCCTCCTCCTC
CATGGAGGCCACTGCCTGAAGAGCTTGGACATGGCCATGGAGATGGAGATGGATTCAGAG
GCTCACAGCAGGATGCTGTGGGAGTCCAGCAGCAGCAACGGCAGGAGGTACATCAGCTAC
GACGCCCTGAGGAGCGACGTGGTGCCGTGCTCGAGGCAGGGTGTCCCTTACTATAACTGC
AGGATCATGACCACCGCCAACCCTTACACCCGGGGATGCGAGACCATCACCAGGTGCAGG
GATGTGGATCCGTGA

Peptide Sequence

PEP ID

Os11t0456000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:15445157:15445843:-1 gene:Os11g0456000 transcript:Os11t0456000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 33 description:Similar to RALF. (Os11t0456000-01)
Sequence

MPPPSITTTTTKLFLLLLLLHGGHCLKSLDMAMEMEMDSEAHSRMLWESSSSNGRRYISY
DALRSDVVPCSRQGVPYYNCRIMTTANPYTRGCETITRCRDVDP

Transcript Sequence

Transcript ID

Os11t0456000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:15445157:15445843:-1 gene:Os11g0456000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 33 description:Similar to RALF. (Os11t0456000-01)
Sequence

GCCCCATAGAGAGAGAAAATTCAGCTACTCCTAGATGAGACCCTGAGTGAGAGAAGAAGC
AAAGAAACAACAACAAGAAGAAAGAGAGATCTCCCTCTTCCATCAACAATGCCACCACCA
TCAATCACCACCACCACCACCAAGCTGTTCTTGCTCCTCCTCCTCCTCCATGGAGGCCAC
TGCCTGAAGAGCTTGGACATGGCCATGGAGATGGAGATGGATTCAGAGGCTCACAGCAGG
ATGCTGTGGGAGTCCAGCAGCAGCAACGGCAGGAGGTACATCAGCTACGACGCCCTGAGG
AGCGACGTGGTGCCGTGCTCGAGGCAGGGTGTCCCTTACTATAACTGCAGGATCATGACC
ACCGCCAACCCTTACACCCGGGGATGCGAGACCATCACCAGGTGCAGGGATGTGGATCCG
TGATTACTACTGCACTGCCTGCTTGTTTTGCTGGATGATCTTGCCATGAGAGGAATTGCA
GGAGTGGCTACCTGAGATGCAAATCTTGGTTTTTATTTTTTTTTTGTTTTTCTTTTACCC
TCTCTTCTGTTCTTTCTTCTTCTTTATGTTCTGCATTTGCTGAATCATTGTAGGTGATTC
ATGGATGATTTACATGTTCAAAGATCTTATGAGTATGTATATGTAAGATCTGGTTGCAAG
CTATAATATTATAAGGAAGCTTGGATC