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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0451700-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:15223376:15224746:-1 gene:Os11g0451700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRIN 6 description:Similar to Dehydrin DHN1 (M3) (RAB-17 protein). (Os11t0451700-00)
Sequence

ATGGCGCACTTCCAGGGACAGCAGCACGGCCACCCGGCGGCGCGCGTCGACGAGTACGGC
AACCCGGTGGCGGCCGGCCACGGCATCACCGGGACGCAAGAGGCAGGCGCCGGAGGGTAC
GGCGCCGCCGGCAACGTTGCGCAGCCTCAGCATGCGTTCGGCGGCGCCACCGACGCCGGG
GGTTATGGCCGGCAGGCCGGATACGGCGCCACCGGCACCGGCACCCACGACGCCGCGGGC
TATGGTGGTTCCGGTCAGCCGGCGTACGGCGCTACCGGCACTGGCGTCCATGACGCCGGT
GGTTTAATGCCTGGGCACACTGCCGGGCATGGTACCACCGGCACCGGAGTCCACCACGGC
GCCGGCGCCGGTTTACCCGCGGGGCAGACCGCCGGGTACGGAACAACCGGCGTCACCGGA
GCTCAGCACGGAGCTGGTGGACTAGGAACCGGGCACACAGCCGGGTACGGAACCACCGGA
GCCCACCACGGCGCCGGTGGCTTGGGCACCAGGCACATGGCTGGACACGGAGCCACCACA
ACACCCGACACCATGGCATACGGAACCACCGGCACAGGGGCGCCACACGGCGCCACCGCC
GGCACCGGCGCGTATCCGCACGCAGGCGGCCAGTTCCAGCCGGCGAGAGAGGAGCACAAG
ACCGGTGGCATCCTCCGCCGCTCCGGCAGTTCAAGCTCAAGCTCGTCGTCTGAGGACGAC
GGGATGGGAGGGAGGAGGAAGAAGGGAATCAAGGAGAAGATCAAGGAGAAGCTCCCCGGC
GGCAACAAGGGCGGCCAGCAGCAGCCGACGGCCACTGCGGCGACCGGCGGATATGGTGCC
GGCACGGGACACACCGCCGCCGCTGGTACAACCACCGACGCCGGCGGGACGGCGTATACA
CCGACGACGCAGCCGACGCACGAGAAGAAGGGTATGATGGAGAAGATCAAGGAGAAGCTC
CCCGGTGGTGGCCATCACTGA

Peptide Sequence

PEP ID

Os11t0451700-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:15223376:15224746:-1 gene:Os11g0451700 transcript:Os11t0451700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRIN 6 description:Similar to Dehydrin DHN1 (M3) (RAB-17 protein). (Os11t0451700-00)
Sequence

MAHFQGQQHGHPAARVDEYGNPVAAGHGITGTQEAGAGGYGAAGNVAQPQHAFGGATDAG
GYGRQAGYGATGTGTHDAAGYGGSGQPAYGATGTGVHDAGGLMPGHTAGHGTTGTGVHHG
AGAGLPAGQTAGYGTTGVTGAQHGAGGLGTGHTAGYGTTGAHHGAGGLGTRHMAGHGATT
TPDTMAYGTTGTGAPHGATAGTGAYPHAGGQFQPAREEHKTGGILRRSGSSSSSSSSEDD
GMGGRRKKGIKEKIKEKLPGGNKGGQQQPTATAATGGYGAGTGHTAAAGTTTDAGGTAYT
PTTQPTHEKKGMMEKIKEKLPGGGHH

Transcript Sequence

Transcript ID

Os11t0451700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:15223376:15224746:-1 gene:Os11g0451700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRIN 6 description:Similar to Dehydrin DHN1 (M3) (RAB-17 protein). (Os11t0451700-00)
Sequence

ACACAACACGCAGTGATCGAGTCGGGCTCGAGCGACGTCGTACGCTGAGAAGATGGCGCA
CTTCCAGGGACAGCAGCACGGCCACCCGGCGGCGCGCGTCGACGAGTACGGCAACCCGGT
GGCGGCCGGCCACGGCATCACCGGGACGCAAGAGGCAGGCGCCGGAGGGTACGGCGCCGC
CGGCAACGTTGCGCAGCCTCAGCATGCGTTCGGCGGCGCCACCGACGCCGGGGGTTATGG
CCGGCAGGCCGGATACGGCGCCACCGGCACCGGCACCCACGACGCCGCGGGCTATGGTGG
TTCCGGTCAGCCGGCGTACGGCGCTACCGGCACTGGCGTCCATGACGCCGGTGGTTTAAT
GCCTGGGCACACTGCCGGGCATGGTACCACCGGCACCGGAGTCCACCACGGCGCCGGCGC
CGGTTTACCCGCGGGGCAGACCGCCGGGTACGGAACAACCGGCGTCACCGGAGCTCAGCA
CGGAGCTGGTGGACTAGGAACCGGGCACACAGCCGGGTACGGAACCACCGGAGCCCACCA
CGGCGCCGGTGGCTTGGGCACCAGGCACATGGCTGGACACGGAGCCACCACAACACCCGA
CACCATGGCATACGGAACCACCGGCACAGGGGCGCCACACGGCGCCACCGCCGGCACCGG
CGCGTATCCGCACGCAGGCGGCCAGTTCCAGCCGGCGAGAGAGGAGCACAAGACCGGTGG
CATCCTCCGCCGCTCCGGCAGTTCAAGCTCAAGCTCGTCGTCTGAGGACGACGGGATGGG
AGGGAGGAGGAAGAAGGGAATCAAGGAGAAGATCAAGGAGAAGCTCCCCGGCGGCAACAA
GGGCGGCCAGCAGCAGCCGACGGCCACTGCGGCGACCGGCGGATATGGTGCCGGCACGGG
ACACACCGCCGCCGCTGGTACAACCACCGACGCCGGCGGGACGGCGTATACACCGACGAC
GCAGCCGACGCACGAGAAGAAGGGTATGATGGAGAAGATCAAGGAGAAGCTCCCCGGTGG
TGGCCATCACTGAGCCCTTTTTGAGGTTCAGTTTAGCTCCAGCTTTGGAGTGGCCGTACA
CTGTTCAGAATAACCAATACTCCGATGTATGGATGAATAAAAACGAGTGGTTGCATGCTT
CAATGTGTTGCTAATATTAATATCGGTCATAGCTTCTTGTATTTCTGAAGTTTGTACTTG
CCTGTCTTTTAAAATGTTTCCTTGTATTTATGAAGTTTGTACCTGCCTGCCTTTTAAAAT
GTTTCCATAATGTTGCTAGT