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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0448700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:14997460:14998182:1 gene:Os11g0448700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 31 description:Conserved hypothetical protein. (Os11t0448700-01)
Sequence

ATGAAGCTGATGCTCCTCTTCGCCGCCACCGTCGTCGCCGCGGCGTTGGTGCTGGTGGCG
GCGGTGGATGTCGGCAGCAGCGGCGCCTTGTTGCCGATGCACGTGCTGCGCGGCCGGGTG
GCTGACGTCGAGGACGTGGTGGCGAGCGTGGTGGAGGAGGAGGAGGCAGCGTACCCGCGG
AGGAGGATCCTCTACGACAGCCGGTACGCCAGCTACAACGGGCTCACGGAGAGCAAGGCG
GCGTGCTACGGCTCCTGCCCCGGCAGGGGCCAGCCGTACAGCGGACGCAGCTGCCTCAAC
ATCTACCAGTGCAAGGGCTAA

Peptide Sequence

PEP ID

Os11t0448700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:14997460:14998182:1 gene:Os11g0448700 transcript:Os11t0448700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 31 description:Conserved hypothetical protein. (Os11t0448700-01)
Sequence

MKLMLLFAATVVAAALVLVAAVDVGSSGALLPMHVLRGRVADVEDVVASVVEEEEAAYPR
RRILYDSRYASYNGLTESKAACYGSCPGRGQPYSGRSCLNIYQCKG

Transcript Sequence

Transcript ID

Os11t0448700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:14997460:14998182:1 gene:Os11g0448700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 31 description:Conserved hypothetical protein. (Os11t0448700-01)
Sequence

CCCCATTTTTATTCGTCTCAGCTAGCTAGCAGCTAGCCCAAGTACTGACATACAGTATGA
AGCTGATGCTCCTCTTCGCCGCCACCGTCGTCGCCGCGGCGTTGGTGCTGGTGGCGGCGG
TGGATGTCGGCAGCAGCGGCGCCTTGTTGCCGATGCACGTGCTGCGCGGCCGGGTGGCTG
ACGTCGAGGACGTGGTGGCGAGCGTGGTGGAGGAGGAGGAGGCAGCGTACCCGCGGAGGA
GGATCCTCTACGACAGCCGGTACGCCAGCTACAACGGGCTCACGGAGAGCAAGGCGGCGT
GCTACGGCTCCTGCCCCGGCAGGGGCCAGCCGTACAGCGGACGCAGCTGCCTCAACATCT
ACCAGTGCAAGGGCTAAAAGCTTGGAGAAATTAAAGCTGCTGGTGATATGATCGATCGAT
CGATCCTCTGCAATAATTCTGCGTCTGTACTGCAGGGGAAGATATGTTCAAACTAACTGT
GTTGAAATGATACTGGTGAATTTGTATGCTGTTGATGACTTTGTGTTAGTCGATCACTTC
ATATATGTAATATGTAGTTAAGTGTTGTATCCGATTCACGTACGCTCGTAGTTAATAGCT
AGTTTGAGCGTTAGATACAATTAATATCCGGCCTATACGATTCATTGTTGTTCGATGAAT
TACTGGGACGAAGAAACTGATTAATCGATGAATAAAACAAAGGTTTGCATCTGCATAGAA
GTT