Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0447300-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:14883702:14890574:1 gene:Os11g0447300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 1 description:GTP-binding protein, HSR1-related domain containing protein. (Os11t0447300-01)
Sequence	ATGCGGGGGCTGGCGCGGGCGGGGAAGCGCGCCAGCGAGATGGCGTTCAACGCCGGGGGA GGCGCCGTCAACTGGTTCCCCGGCCACATGGCCGCCGCCTCGCGCGCCATCCGCGACCGC CTCAAGCTCGCCGACCTCGTCCTCGAGGTCCGCGACGCCCGGATTCCGTTGTCCTCAGCG AATGAAGACCTTCAACCTGTGCTTGCATCTAAGAGGCGTATCCTTGCTCTAAACAAGAAA GATCTAGCAAATCCTAATATAATGAATAGGTGGCTTCATCATTTTGAATCATGTAAGCAG GATTGCATTTCGATAAATGCACATAGCACCAGTTCTGTTAGTCAGCTTCTTGGGCTAGTG GAGTTCAAACTAAAGGAAGCAATCTCAAAAGAGCCCACACTTCTTGTTATGGTTGTTGGT GTTCCCAATGTTGGCAAGTCTGCCCTCATAAATTCCATTCATAGAATTGTCACTTCTCGT TTTCCAGTGCAAGATAAGAACAAGCGAGCTACAGTAGGACCATTGCCTGGTGTTACTCAA GATATTGCAGGATATAAGATTTCAAGCCAGCCGAGCATTTATGTACTTGATACACCAGGT GTTCTAGTACCAAGCATTCCAGACATGGAGACTGGTTTAAAGCTTGCTCTGACAGGAGCC GTCAAGGACTCTGTGGTTGGAGAGGAGCGTATAGCGAAATATTTATTGTCTCTTCTTAAT ATTAGAAAAACCCCTCTACATTGGGAGCGACTAGTTTACCGAAGAGAACAATTCAATGAA GATGCATTCAATAGTAATGAAAAAGACTATAGAGATTCACCACGAAGGAGGAGGCGACCA AATAACTCTGACGCCTTATATGTACAGGACATGGTGATGGAGGTCCAGAGAACACTTTGC AGTACATTTATGGACTTCGCGGACAACACTGAGGATGAGAACGAGCTTGAAAGCCTGATA GACTCACAGCTTGTCGCTCTTCGCAAGGTGTTCAGGATACCTCACAAACCGTTTGATGAA ACGCATGGTCCGGCCTCCAAGAAGTTGTTGACTCTTTTCAGATCAGGGAAGCTTGGCCCT TTCATCCTCGACGACCTTCCAGATAATCAGTAA

Peptide Sequence

PEP ID	Os11t0447300-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:14883702:14890574:1 gene:Os11g0447300 transcript:Os11t0447300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 1 description:GTP-binding protein, HSR1-related domain containing protein. (Os11t0447300-01)
Sequence	MRGLARAGKRASEMAFNAGGGAVNWFPGHMAAASRAIRDRLKLADLVLEVRDARIPLSSA NEDLQPVLASKRRILALNKKDLANPNIMNRWLHHFESCKQDCISINAHSTSSVSQLLGLV EFKLKEAISKEPTLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVGPLPGVTQ DIAGYKISSQPSIYVLDTPGVLVPSIPDMETGLKLALTGAVKDSVVGEERIAKYLLSLLN IRKTPLHWERLVYRREQFNEDAFNSNEKDYRDSPRRRRRPNNSDALYVQDMVMEVQRTLC STFMDFADNTEDENELESLIDSQLVALRKVFRIPHKPFDETHGPASKKLLTLFRSGKLGP FILDDLPDNQ

Transcript Sequence

Transcript ID	Os11t0447300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:14883702:14890574:1 gene:Os11g0447300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAPID ALKALIZATION FACTOR 1 description:GTP-binding protein, HSR1-related domain containing protein. (Os11t0447300-01)
Sequence	AAGAGAGAGGGGTTTTTCAATTTCGAAGTCCATTCACGCGCAGCCTACGCGCGGCGACAC GCCGTCACACCGTCTGACCGCACCGCCGACTGCACCATCCGGCGCCGCCGCGGCGCGCTC GCGCGGGGGTGGGCACGATGCGGGGGCTGGCGCGGGCGGGGAAGCGCGCCAGCGAGATGG CGTTCAACGCCGGGGGAGGCGCCGTCAACTGGTTCCCCGGCCACATGGCCGCCGCCTCGC GCGCCATCCGCGACCGCCTCAAGCTCGCCGACCTCGTCCTCGAGGTCCGCGACGCCCGGA TTCCGTTGTCCTCAGCGAATGAAGACCTTCAACCTGTGCTTGCATCTAAGAGGCGTATCC TTGCTCTAAACAAGAAAGATCTAGCAAATCCTAATATAATGAATAGGTGGCTTCATCATT TTGAATCATGTAAGCAGGATTGCATTTCGATAAATGCACATAGCACCAGTTCTGTTAGTC AGCTTCTTGGGCTAGTGGAGTTCAAACTAAAGGAAGCAATCTCAAAAGAGCCCACACTTC TTGTTATGGTTGTTGGTGTTCCCAATGTTGGCAAGTCTGCCCTCATAAATTCCATTCATA GAATTGTCACTTCTCGTTTTCCAGTGCAAGATAAGAACAAGCGAGCTACAGTAGGACCAT TGCCTGGTGTTACTCAAGATATTGCAGGATATAAGATTTCAAGCCAGCCGAGCATTTATG TACTTGATACACCAGGTGTTCTAGTACCAAGCATTCCAGACATGGAGACTGGTTTAAAGC TTGCTCTGACAGGAGCCGTCAAGGACTCTGTGGTTGGAGAGGAGCGTATAGCGAAATATT TATTGTCTCTTCTTAATATTAGAAAAACCCCTCTACATTGGGAGCGACTAGTTTACCGAA GAGAACAATTCAATGAAGATGCATTCAATAGTAATGAAAAAGACTATAGAGATTCACCAC GAAGGAGGAGGCGACCAAATAACTCTGACGCCTTATATGTACAGGACATGGTGATGGAGG TCCAGAGAACACTTTGCAGTACATTTATGGACTTCGCGGACAACACTGAGGATGAGAACG AGCTTGAAAGCCTGATAGACTCACAGCTTGTCGCTCTTCGCAAGGTGTTCAGGATACCTC ACAAACCGTTTGATGAAACGCATGGTCCGGCCTCCAAGAAGTTGTTGACTCTTTTCAGAT CAGGGAAGCTTGGCCCTTTCATCCTCGACGACCTTCCAGATAATCAGTAAAAGGCTGGGG TGCATGGCGGAGCTTAGGACTTTAATCCTGTGAGGTCAATTACTAGTAATTTGTATTTAA GTGGAGTCATTTCTCTAAATTTTTTGAATTTATACATGAAAATCAAGGTTTGTAGGGTGT TTTTTAAAAAGCTGTGGGGTCAGCCGACCCCCACAGAATATGCCTGGATCCGCCACCCGT GCATGTATGAATTATATGTATGTTTATGAGCAGCTAAGGATTTCTCCTGATAGAGATGGC TCGATATGATAATGATAGATGGTGATGGGCGTCCCTCTAGGGAGCAGCTTTTTTTTTCTT TTTT