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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0444900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:14713272:14714398:1 gene:Os11g0444900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os11t0444900-01)
Sequence

ATGGTGGGAACCTCCTCCTGGTCATCGTCCTCGACGTGCACGTCGTCGCTCGGCTCTCTC
GACGACGACGTCGTCGTCGCGTGCGTCGTCAAGGCAGCGGACGCCGCAGCCGAGGGGACG
TTCGTCAAGTTCCTCTGCAGCTACGGCGGGAGGATCCTCCCTCGCCACGCCGACGGCGCG
TTGCGCTACGTCGGCGGCGACAACCGCGTCGTCTCCGTCGACCGCTCCCTCCCTTTCCAC
GAGTTGCAACGGAAGCTGAGGGAGATGTGCGGGTGGGAGGCGGTGTGCCTGCGGTGCCAG
CTCCCGACGGAGGACCTGGACGCGCTCGTCTCCGTCACCGGCGACGACGACCTCGCCAAC
CTGCTGGAGGAGTACGACGCGGCCAGCCGGGACCGCCTCCAGCCGCTCAAGATCCGGGCG
TTCCTGTTCCCAAGGACGACGACAACGACACCGCCGCCGCCGTCCAGGACGGTACCCCAT
GCCCTGTACCACCGTCAGACTGGCAGCGCGCCGTCGTGCGCATCCCGGTGGGCGGCGCAT
CAGATGTCGTCTCCTCCCGCTCGTGTTCTGCACCAGCAGCAGCATCACAACCGGCACAGC
GGCGAGGCGCGGCCGCACCGGTACCTAGTCCAGAGTGCCAGCCACTGGTAA

Peptide Sequence

PEP ID

Os11t0444900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:14713272:14714398:1 gene:Os11g0444900 transcript:Os11t0444900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os11t0444900-01)
Sequence

MVGTSSWSSSSTCTSSLGSLDDDVVVACVVKAADAAAEGTFVKFLCSYGGRILPRHADGA
LRYVGGDNRVVSVDRSLPFHELQRKLREMCGWEAVCLRCQLPTEDLDALVSVTGDDDLAN
LLEEYDAASRDRLQPLKIRAFLFPRTTTTTPPPPSRTVPHALYHRQTGSAPSCASRWAAH
QMSSPPARVLHQQQHHNRHSGEARPHRYLVQSASHW

Transcript Sequence

Transcript ID

Os11t0444900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:14713272:14714398:1 gene:Os11g0444900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Octicosapeptide/Phox/Bem1p domain containing protein. (Os11t0444900-01)
Sequence

GAAGCGGCTCGCTCATGGGGGCAGCAAGGCCAGAGAGCTATAGCTAGCCAAGATTCTCCA
GTGAGATTCTCAGCTGTCCCCGGCCGTTCGTCCGTCCAAGGAAGGAGAGCCATGGTGGGA
ACCTCCTCCTGGTCATCGTCCTCGACGTGCACGTCGTCGCTCGGCTCTCTCGACGACGAC
GTCGTCGTCGCGTGCGTCGTCAAGGCAGCGGACGCCGCAGCCGAGGGGACGTTCGTCAAG
TTCCTCTGCAGCTACGGCGGGAGGATCCTCCCTCGCCACGCCGACGGCGCGTTGCGCTAC
GTCGGCGGCGACAACCGCGTCGTCTCCGTCGACCGCTCCCTCCCTTTCCACGAGTTGCAA
CGGAAGCTGAGGGAGATGTGCGGGTGGGAGGCGGTGTGCCTGCGGTGCCAGCTCCCGACG
GAGGACCTGGACGCGCTCGTCTCCGTCACCGGCGACGACGACCTCGCCAACCTGCTGGAG
GAGTACGACGCGGCCAGCCGGGACCGCCTCCAGCCGCTCAAGATCCGGGCGTTCCTGTTC
CCAAGGACGACGACAACGACACCGCCGCCGCCGTCCAGGACGGTACCCCATGCCCTGTAC
CACCGTCAGACTGGCAGCGCGCCGTCGTGCGCATCCCGGTGGGCGGCGCATCAGATGTCG
TCTCCTCCCGCTCGTGTTCTGCACCAGCAGCAGCATCACAACCGGCACAGCGGCGAGGCG
CGGCCGCACCGGTACCTAGTCCAGAGTGCCAGCCACTGGTAATAGCGATCAGATTGAGAA
CCGGGCGTGGTCTAGTATCTGCCTACGTAACCCTGCTCTGTACGTAGTAATAGAAGTGTT
TAATTAGCATGTACTAGTGCTGTTGTACTGGCTTCTTTTAGAGCACAAAAAGCACGGAAT
GGCCGAGATCGAGTAATTGAAAATAGAACAAAACCTAATACTCCTATATTAGACGGAGAT
AAGGTTCAGATGTTGAGTGGAGTGCATGTCGATCTGTTTGTTAGCTGATGCCAGCGAAGT
ATTTGTTTGCTCTGC