Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0439600-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:14390405:14398122:-1 gene:Os11g0439600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nod factor binding lectin-nucleotide phosphohydrolase. (Os11t0439600-01)
Sequence	ATGGCACGCTCCGCCGTGTTGTTGCACGCCGTCCTCCTCGTCCTCGCCGTCGCGGTGTCG TCGTGGCGTGGCGTGGTCTCCGGCGACGCGGCGGTGGTGCTCGGCCGGAAGGCCGCCGGG ATGAGTAGTGCTGCAGCGTCGTCGTCGGCCGACGACGACCTGCCGGCGCTGCAGATCTCG GCGAGGAAGGACGGCGCCGGGAACGATAAGTACGCCGTGATCTTCGACGCCGGCAGCACC GGGAGCCGGGTTCACGTCTTCAGGTTCGACAAGCAGATGGACCTCGTCAAGATCGGCGAC GACATGGAGCTCTTCGCCAAGGTGAAGCCCGGGTTGAGCTCATATGCTGGCAAACCACAG GAAGCTGCAAACTCCATTGCTCCTCTGCTAGAGAAGGCTAAAGGTGTTGTTCCCAAGCAG CTTCAGAAAAGAACTCCCCTCAAACTTGGGGCCACTGCTGGTCTAAGACTGATTGGAGAT GAGAAGTCAGAGCAAATTCTTGAAGCGGTTCGAGATCTTGTCCACAGCAAGAGCAATTTC CAGTACAAACCAGAATGGATCAGTGTCCTTGGGGGTTCTCAAGAAGGATCCAACCTCTGG GTTGCTCTGAACTATCTTTTGGGGAAGTTAGGAGGGGATTACTCAAAAACCGTAGGAGTG ATCGATCTCGGAGGTGGTTCAGTTCAAATGGCCTATGCCATTTCTTCAGATGCTGCAGAA AACTCTCCTCCAGTCCCTGTCGGCAAAGATCCTTATGTTACAAAGGAGTATCTCAAGGGA AAAGATTATAACCTTTATGTTCACAGTTACTTGCATTATGGGCTCCAAGCTTCTCGCGTC GAGATTCTTAAGACGAAGAATGGGCAATTCAGCTCCTGCATGCTTCGCGAATTCAATGGT ACATACAAGTACAACGGCGAGGAGTACGACGCGGCGGCGTCGCCGGAAGGGGCGGACCAC GGCAAGTGCGGCGAGGAGGCGGCGGCGGCGCTGGGCCTGGACGCGCCGTGCGAGTCCCGG AACTGCAGCTTCAACGGCGTGTGGAACGGCGGCGGCGGCGCCGGCATGGCCGACCTCTAC GTGGCGTCCTACTTCTACGACAGGGCGGTGCACGGCGGGTTCGTCGTCGACGACGCGCCG AGCGCCGTGACCACCCCGGCGGCGTTCGCGGAGGCGGCGTCGAAGGCCTGCTCGCTGAGC TCCGGCGAGGCCGCGGCCGCGTACCCGGAGGCGTTCGACGTGCAGTTCATATGCATGGAC CTGACGTACCAGTACACATTGCTTACAAAGGGCTTCGGTTTGAAGCCAACTAGGGAGATG ACGCTTGTGAAACAGGTCAAGTATGGGGATTGCTACGTGGAGTCGGCGTGGCCGCTGGGT ACTGCCATAGAAGCCTTGTCCTCCCAGAAGAGTCATCAGTCTGCATGA

Peptide Sequence

PEP ID	Os11t0439600-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:14390405:14398122:-1 gene:Os11g0439600 transcript:Os11t0439600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nod factor binding lectin-nucleotide phosphohydrolase. (Os11t0439600-01)
Sequence	MARSAVLLHAVLLVLAVAVSSWRGVVSGDAAVVLGRKAAGMSSAAASSSADDDLPALQIS ARKDGAGNDKYAVIFDAGSTGSRVHVFRFDKQMDLVKIGDDMELFAKVKPGLSSYAGKPQ EAANSIAPLLEKAKGVVPKQLQKRTPLKLGATAGLRLIGDEKSEQILEAVRDLVHSKSNF QYKPEWISVLGGSQEGSNLWVALNYLLGKLGGDYSKTVGVIDLGGGSVQMAYAISSDAAE NSPPVPVGKDPYVTKEYLKGKDYNLYVHSYLHYGLQASRVEILKTKNGQFSSCMLREFNG TYKYNGEEYDAAASPEGADHGKCGEEAAAALGLDAPCESRNCSFNGVWNGGGGAGMADLY VASYFYDRAVHGGFVVDDAPSAVTTPAAFAEAASKACSLSSGEAAAAYPEAFDVQFICMD LTYQYTLLTKGFGLKPTREMTLVKQVKYGDCYVESAWPLGTAIEALSSQKSHQSA

Transcript Sequence

Transcript ID	Os11t0439600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:14390405:14398122:-1 gene:Os11g0439600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Nod factor binding lectin-nucleotide phosphohydrolase. (Os11t0439600-01)
Sequence	ACCCACCAGCAACTCCCTGACTCCATCGGAGTATATTAGCTCGTAGCTGAGTGCGGCTCA GTCTGCCAGCTCGATCGGAGGCGCTTTCATCGATCGGCGGCGGCAGCGATGGCACGCTCC GCCGTGTTGTTGCACGCCGTCCTCCTCGTCCTCGCCGTCGCGGTGTCGTCGTGGCGTGGC GTGGTCTCCGGCGACGCGGCGGTGGTGCTCGGCCGGAAGGCCGCCGGGATGAGTAGTGCT GCAGCGTCGTCGTCGGCCGACGACGACCTGCCGGCGCTGCAGATCTCGGCGAGGAAGGAC GGCGCCGGGAACGATAAGTACGCCGTGATCTTCGACGCCGGCAGCACCGGGAGCCGGGTT CACGTCTTCAGGTTCGACAAGCAGATGGACCTCGTCAAGATCGGCGACGACATGGAGCTC TTCGCCAAGGTGAAGCCCGGGTTGAGCTCATATGCTGGCAAACCACAGGAAGCTGCAAAC TCCATTGCTCCTCTGCTAGAGAAGGCTAAAGGTGTTGTTCCCAAGCAGCTTCAGAAAAGA ACTCCCCTCAAACTTGGGGCCACTGCTGGTCTAAGACTGATTGGAGATGAGAAGTCAGAG CAAATTCTTGAAGCGGTTCGAGATCTTGTCCACAGCAAGAGCAATTTCCAGTACAAACCA GAATGGATCAGTGTCCTTGGGGGTTCTCAAGAAGGATCCAACCTCTGGGTTGCTCTGAAC TATCTTTTGGGGAAGTTAGGAGGGGATTACTCAAAAACCGTAGGAGTGATCGATCTCGGA GGTGGTTCAGTTCAAATGGCCTATGCCATTTCTTCAGATGCTGCAGAAAACTCTCCTCCA GTCCCTGTCGGCAAAGATCCTTATGTTACAAAGGAGTATCTCAAGGGAAAAGATTATAAC CTTTATGTTCACAGTTACTTGCATTATGGGCTCCAAGCTTCTCGCGTCGAGATTCTTAAG ACGAAGAATGGGCAATTCAGCTCCTGCATGCTTCGCGAATTCAATGGTACATACAAGTAC AACGGCGAGGAGTACGACGCGGCGGCGTCGCCGGAAGGGGCGGACCACGGCAAGTGCGGC GAGGAGGCGGCGGCGGCGCTGGGCCTGGACGCGCCGTGCGAGTCCCGGAACTGCAGCTTC AACGGCGTGTGGAACGGCGGCGGCGGCGCCGGCATGGCCGACCTCTACGTGGCGTCCTAC TTCTACGACAGGGCGGTGCACGGCGGGTTCGTCGTCGACGACGCGCCGAGCGCCGTGACC ACCCCGGCGGCGTTCGCGGAGGCGGCGTCGAAGGCCTGCTCGCTGAGCTCCGGCGAGGCC GCGGCCGCGTACCCGGAGGCGTTCGACGTGCAGTTCATATGCATGGACCTGACGTACCAG TACACATTGCTTACAAAGGGCTTCGGTTTGAAGCCAACTAGGGAGATGACGCTTGTGAAA CAGGTCAAGTATGGGGATTGCTACGTGGAGTCGGCGTGGCCGCTGGGTACTGCCATAGAA GCCTTGTCCTCCCAGAAGAGTCATCAGTCTGCATGATCCATTTAGCTATATCACGCAAGG ATGCCTACATATATGTATGTGTTCTGATTCACGTACGTTTGAGCGGTGGAGAAGATGTTT GGCAGATTTGAGTAGCAAATTCATAACACTGCGCAATTAATAACTTAATAAAATGGTATT GTTTGACGGC