Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0437600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:14267738:14268964:1 gene:Os11g0437600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os11t0437600-01)
Sequence

ATGACGACGCCATGTGCGAGCTCCAGGGCGAAGCGCGCCACCGCGCCGCTGGACGCCGCC
GCGATGGCCCGCCTCGCCGTCGTCCCGGGCAGCGCTGACAGCAGCGGCAGCGAGCACGAG
GCCGCGCTGTCCAGCCTCGTCAACGAGTACCTCCTCGAGGCGGCCGACGACGCCACCGTC
CCCTCCGCCGCCGTGCTCGCCGTTGGTGGAGGCTCCGACGCCGAGGAGGATGACGAGCAC
GAGGGCGGCGTCGGCGCGGCTGAGGAGGTCGACGAGATCGCACGCGTTCTGGACGCCGCC
GGTGGGGGCGACGGTGATGATCTGCGCCGCCGGATCTTCGCCGACGTGGTGGATTCCATG
CGTGAGCTGGAGAACGTCCGCGCCCAACGGTCGGCGTTCCGGCGCGCGGTGATGTCCCTC
CTGCGGGAGCGCGGCCACGACGCTGGCCTCTGCAAGGCGCGGTGGAACAAGACGAGCAGC
ATGGTCGCCGGAAGCTACGAGTACATCGATGTCGTCGTCGCCGCCGCACCAGATGCTGCA
GAGGCGACGAGATACATCGTCGACGTCGGCTTCGCCGGTGAGTTCGAGGTGGCGCGGCCG
ACGGAAGACTACGAGGCCGTGCGCTCCGCGCTGCCGGAGGTGCTCGTCGCGAGGCCCGAC
GACGTGAGGAAGGTCGTCAGGGCGGCGGCGTCGGCGGCGCGGCGTTCGCTGAAGCGCCGC
CGCCTCAGCGTGCCGCCGTGGAGGAAGCGCAAGTTCATGATTGCCAAATGGCTTGGCCCG
TACAGGAGGACGGTGAACGCCGTGCCGACGTCTGCCGGCACGGCGATCGACGGCGGCAGC
TCGTTGGCTGTCTGCCGGACAGTCCATGGTTTCGAGGCGCCGCCTCTGGTCATGACGACG
CCGACCGGGCTCTGGGGTTGA

Peptide Sequence

PEP ID

Os11t0437600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:14267738:14268964:1 gene:Os11g0437600 transcript:Os11t0437600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os11t0437600-01)
Sequence

MTTPCASSRAKRATAPLDAAAMARLAVVPGSADSSGSEHEAALSSLVNEYLLEAADDATV
PSAAVLAVGGGSDAEEDDEHEGGVGAAEEVDEIARVLDAAGGGDGDDLRRRIFADVVDSM
RELENVRAQRSAFRRAVMSLLRERGHDAGLCKARWNKTSSMVAGSYEYIDVVVAAAPDAA
EATRYIVDVGFAGEFEVARPTEDYEAVRSALPEVLVARPDDVRKVVRAAASAARRSLKRR
RLSVPPWRKRKFMIAKWLGPYRRTVNAVPTSAGTAIDGGSSLAVCRTVHGFEAPPLVMTT
PTGLWG

Transcript Sequence

Transcript ID

Os11t0437600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:14267738:14268964:1 gene:Os11g0437600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF506, plant family protein. (Os11t0437600-01)
Sequence

TCTAAGTACAGCAACTTCCGATCTCTCTGCAGATGACGACGCCATGTGCGAGCTCCAGGG
CGAAGCGCGCCACCGCGCCGCTGGACGCCGCCGCGATGGCCCGCCTCGCCGTCGTCCCGG
GCAGCGCTGACAGCAGCGGCAGCGAGCACGAGGCCGCGCTGTCCAGCCTCGTCAACGAGT
ACCTCCTCGAGGCGGCCGACGACGCCACCGTCCCCTCCGCCGCCGTGCTCGCCGTTGGTG
GAGGCTCCGACGCCGAGGAGGATGACGAGCACGAGGGCGGCGTCGGCGCGGCTGAGGAGG
TCGACGAGATCGCACGCGTTCTGGACGCCGCCGGTGGGGGCGACGGTGATGATCTGCGCC
GCCGGATCTTCGCCGACGTGGTGGATTCCATGCGTGAGCTGGAGAACGTCCGCGCCCAAC
GGTCGGCGTTCCGGCGCGCGGTGATGTCCCTCCTGCGGGAGCGCGGCCACGACGCTGGCC
TCTGCAAGGCGCGGTGGAACAAGACGAGCAGCATGGTCGCCGGAAGCTACGAGTACATCG
ATGTCGTCGTCGCCGCCGCACCAGATGCTGCAGAGGCGACGAGATACATCGTCGACGTCG
GCTTCGCCGGTGAGTTCGAGGTGGCGCGGCCGACGGAAGACTACGAGGCCGTGCGCTCCG
CGCTGCCGGAGGTGCTCGTCGCGAGGCCCGACGACGTGAGGAAGGTCGTCAGGGCGGCGG
CGTCGGCGGCGCGGCGTTCGCTGAAGCGCCGCCGCCTCAGCGTGCCGCCGTGGAGGAAGC
GCAAGTTCATGATTGCCAAATGGCTTGGCCCGTACAGGAGGACGGTGAACGCCGTGCCGA
CGTCTGCCGGCACGGCGATCGACGGCGGCAGCTCGTTGGCTGTCTGCCGGACAGTCCATG
GTTTCGAGGCGCCGCCTCTGGTCATGACGACGCCGACCGGGCTCTGGGGTTGACAACTTG
GCATGCATATGGTAGGGACTAGGGAGTTCATTGGTAGTTTCGAGTAGTATTCATATTTCG
TAGTGATTGCATGGATGATTGGAGAGTAATTGTTTTAGGGGTGATGTAAATATATGATAG
GAGAGTAAATAGCTTGCATTGTTTGTATGGGATTAGTCATCTCTGTTATATATAGGAGAT
TTATTTATTTGGGAATGGAAATTGTAAAAACAAATGTAAGATAGTTGGAAATAGATTGCA
AGGTGTTAATATTGTGGTGATAATGCG