Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0433800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:14038904:14042499:1 gene:Os11g0433800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF635 family protein. (Os11t0433800-01)
Sequence

ATGTCCCATCAATCAGACACATCTTCAAGCTCAAATGATTCCGAAGATAGCAACATCATC
CACCCAGCCAGCATATACTCTATGGAAGAATTCATTGCTGAGCAAAGCATCGTGGACAAT
TTTCTTCAGCGGATCATTGTGAAGATTGAGGCCAAGATTGAAGCTCAGAAAGCTAGTACA
TCTCACCCTCGAAGTGGTGAACGGAAATATGTAAAGAGGAACCGCGAAGAGGGCCATCGA
CGACTCGTGGAAGATTACTTCTCTAAAGATCCAATCTACAGTGATAAACAGTTCCGTGCA
AGGTACCGGATGAGAAGACCCCTTTTTCTACGTATTGTTCATGCCTTAGGTGAGTGGTCT
CCCTATTTCACTAGTAGGAGAGATGCCATTAATCGTCAAGGGCTCTCACCTTTGCAAAAA
TGCACAATAGCCATTCGTGCATTAGCATGTGGCACCCTCGGAGACGCCATTGATGAATAC
GTAGATACTGGTATCAGCACAGCACTGGAGTGTTTGGATTGGTTTGTGGAAGGGGTGATT
GACAATTTTGGTGAAGAATATTTGCGAAGCCCCACTAGTGAGGATATGCAACATATACTA
CAAATGAATGAGGCACGGGGCTTCCCTGGCATGTTAGGAAGTATTGGCTGTATGCACTGG
GAGTGGAAAAATTGCCCAGTTATATGGAGGCGTCACCTTACTCATACCGATCATGGTGCG
ACTACAATGATTCTTGAAGCGGTTGCTTCAAATGACAGCTGGATATGGCATGCTTTCTTT
GGTGCCATTGGATCGAACAATGAGATCACCATTCTCGGCCAACCACAGTTGTTCACCGAA
TTGTTGAAAGGCCAAGCTGCTCATGTGCAATTTTCTGTCAACAGGAGGCAATACAATACA
GGCTACTATCTTGCTGATGGAATATACCCAGAAGGCAATGTCTTTGTTAAAACAGTAACC
CTCCCTCAGAGCGAAAAGGATCAATTGTTTGCACGGCATCAAGAAGGAGCAAGGAAGGAC
GTCCAGGAAGCCTTTGGACTTCTACAATCTCGTTTTGCCATTGTGCGTGGTCCCACTCGT
TTCTTTCAACAAGAGACTCTTGTCAAAATTATGCAAGCTTGCATTATACTTCACAACATG
ACAGTTGAGGATGAGAAAGATATGGGAAGCTCTTGTTTTGACTCGGATGAAATCTTAGGG
ACACTGGCTGTTCTTTTATCAGATATCAACACTGTGCCTGCTGGCTGTTATGCTGAAGTG
GTACGGAGAAATGCTTCTGTTTGTGCTCAACCAACACATGCACAACTTAGAAGGGACTTA
ATGGAGCATATTTGGCAGCGTTTTGGTCCATTTGGCAACAAGTAA

Peptide Sequence

PEP ID

Os11t0433800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:14038904:14042499:1 gene:Os11g0433800 transcript:Os11t0433800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF635 family protein. (Os11t0433800-01)
Sequence

MSHQSDTSSSSNDSEDSNIIHPASIYSMEEFIAEQSIVDNFLQRIIVKIEAKIEAQKAST
SHPRSGERKYVKRNREEGHRRLVEDYFSKDPIYSDKQFRARYRMRRPLFLRIVHALGEWS
PYFTSRRDAINRQGLSPLQKCTIAIRALACGTLGDAIDEYVDTGISTALECLDWFVEGVI
DNFGEEYLRSPTSEDMQHILQMNEARGFPGMLGSIGCMHWEWKNCPVIWRRHLTHTDHGA
TTMILEAVASNDSWIWHAFFGAIGSNNEITILGQPQLFTELLKGQAAHVQFSVNRRQYNT
GYYLADGIYPEGNVFVKTVTLPQSEKDQLFARHQEGARKDVQEAFGLLQSRFAIVRGPTR
FFQQETLVKIMQACIILHNMTVEDEKDMGSSCFDSDEILGTLAVLLSDINTVPAGCYAEV
VRRNASVCAQPTHAQLRRDLMEHIWQRFGPFGNK

Transcript Sequence

Transcript ID

Os11t0433800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:14038904:14042499:1 gene:Os11g0433800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF635 family protein. (Os11t0433800-01)
Sequence

TGGCGGGCTCGCAGCCCAACACTCAGCTCGCCGCCGGCCGATTTCGTCGTCCTTGGCTGC
CTGCCTCCGTCGCCGCCGGTCGTCGTCGGCGCCCATTTTGTCCCACCTCTATCCACCTTA
CGCGCATCCTCCGGTAGCAGCACTGCGTGGTTGCGCCGCCGCCGCCTCCTCCTGTACCGA
CGACAGCAACGCCAAAAACCCTATCCCCATTCCCCTCGCTGCTTGACTGCGCGTTCTCAG
CCGGTTTCCCCCTTCTCTTCGTCGTCGTCACCGTCGCGCCTGCGACTCGGCGTGAACGGG
GGTGGTGGCCGCAGCAGCGCCTGCGCAGCGAGGGGGGTCTCCTGTGCGTGTTGCGCGGCT
GTGTCTTCAGCACTACGGTTCCCCTTCGTCTTCGCCTGGTCGCTTTCACCGATCAATTGC
TCTCTCGCCCTCCTGCACGGAGGAGGTATGTCCCATCAATCAGACACATCTTCAAGCTCA
AATGATTCCGAAGATAGCAACATCATCCACCCAGCCAGCATATACTCTATGGAAGAATTC
ATTGCTGAGCAAAGCATCGTGGACAATTTTCTTCAGCGGATCATTGTGAAGATTGAGGCC
AAGATTGAAGCTCAGAAAGCTAGTACATCTCACCCTCGAAGTGGTGAACGGAAATATGTA
AAGAGGAACCGCGAAGAGGGCCATCGACGACTCGTGGAAGATTACTTCTCTAAAGATCCA
ATCTACAGTGATAAACAGTTCCGTGCAAGGTACCGGATGAGAAGACCCCTTTTTCTACGT
ATTGTTCATGCCTTAGGTGAGTGGTCTCCCTATTTCACTAGTAGGAGAGATGCCATTAAT
CGTCAAGGGCTCTCACCTTTGCAAAAATGCACAATAGCCATTCGTGCATTAGCATGTGGC
ACCCTCGGAGACGCCATTGATGAATACGTAGATACTGGTATCAGCACAGCACTGGAGTGT
TTGGATTGGTTTGTGGAAGGGGTGATTGACAATTTTGGTGAAGAATATTTGCGAAGCCCC
ACTAGTGAGGATATGCAACATATACTACAAATGAATGAGGCACGGGGCTTCCCTGGCATG
TTAGGAAGTATTGGCTGTATGCACTGGGAGTGGAAAAATTGCCCAGTTATATGGAGGCGT
CACCTTACTCATACCGATCATGGTGCGACTACAATGATTCTTGAAGCGGTTGCTTCAAAT
GACAGCTGGATATGGCATGCTTTCTTTGGTGCCATTGGATCGAACAATGAGATCACCATT
CTCGGCCAACCACAGTTGTTCACCGAATTGTTGAAAGGCCAAGCTGCTCATGTGCAATTT
TCTGTCAACAGGAGGCAATACAATACAGGCTACTATCTTGCTGATGGAATATACCCAGAA
GGCAATGTCTTTGTTAAAACAGTAACCCTCCCTCAGAGCGAAAAGGATCAATTGTTTGCA
CGGCATCAAGAAGGAGCAAGGAAGGACGTCCAGGAAGCCTTTGGACTTCTACAATCTCGT
TTTGCCATTGTGCGTGGTCCCACTCGTTTCTTTCAACAAGAGACTCTTGTCAAAATTATG
CAAGCTTGCATTATACTTCACAACATGACAGTTGAGGATGAGAAAGATATGGGAAGCTCT
TGTTTTGACTCGGATGAAATCTTAGGGACACTGGCTGTTCTTTTATCAGATATCAACACT
GTGCCTGCTGGCTGTTATGCTGAAGTGGTACGGAGAAATGCTTCTGTTTGTGCTCAACCA
ACACATGCACAACTTAGAAGGGACTTAATGGAGCATATTTGGCAGCGTTTTGGTCCATTT
GGCAACAAGTAAAACAATCAATCCTCCTGTATGGTTATGTTAAAAGCCTAAGCACCTTTG
AGGTTACTGTAAGCCAACATTTTGGAAAGCCAGAATCTCAAACAGTGTCCCGCTGGATTA
CTTGGGATATTGGACTTCCAACATAACCAATGATGTGGTTCTATTGTTCCCTTTGTCCGA
CTCGCTACTATTCCAACTTGCTGGTACAAGAGCTAGCTCTGTGCTGCTATGTTCTGTTCC
AACTGTGGATGTATTGGGTATTATATAACAAAGAGCATTAGGAGTATATTACTTTTGAGT
TTGTGATACTTT