Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0433101-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:13986611:13988517:1 gene:Os11g0433101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0433101-00)
Sequence	ATGGCAGCTTTGGCTGCGCCCGCGCTGCGCCGTCTCCGCTCGCCGCGGCTCTGCCTTGCC GCCACGGTCAATTGCATCAGCAACAATGCCGCCCCGGCCGCATCCGCTGGGGTCAACCAT GTGCAGGACTCGAACTGGCGCGTCGCGGAGCTGGCCGCGGCCGGGCGAGTCTCGGACGCC CGCAGGCTGTTCGACGGAATGCCCGACCGGGACGTGGTGTCGTGGACGGCGATGGTCGCC GCGTACGCGCGCCGGGGCATGCTCCAGGAGGCGCGGGTGCTGTTCGACCGCCCTGATGCG CGCCGGAACGTGGTCACCTGGACGGCGCTGCTCTCCGGCTACGCGCGCGCACGCCGCGTT GACGAGGCCGAGGCCCTCTTCGAGGGCATGGCGGAGAGGAACGTCGTCTCTTGGAACACG ATGCTGGAGGCGTATACCGCAGTTGGCCGCGTCGAGGATGCGTCTGCCCTTTTCAATCGC ATGCCGGTGAGGGATGCTGGCTCTTGGAACATTCTTCTGTGTGGACTTGTGCGGTCAGGG AGTTTGGAGAGGGCTCGTAAGATGTTTGAGAGAATGCCAGTGAGGGATGTCATGTCATGG ACCACAATGATTTCTGGCCTTGCACGGAATGGAAGCGTTGACGACGCTTGGGTTCTGTTT GATGCCATGCCAGAGAGGAATGTTGTTTCTTGGAATGCCATGATCTCTGGGTATGCACGA AACCACAGGATTGAGGAAGCACTTGATTTGTTCACGAAGATGCCTATTAGGGATGTTGCT TCTTGGAACATTATGATCACTGGCTTTATCCAGAACAAAGACTTGAAGAGTGCACGGCAA CTTTTTGATGAGATGCCTAAAAGGAATGTGATCACTTGGACCACCATGATGAATGGTTAC TTACAATGCATGCAGAGTGAAATGGCACTAAAATTATTTAACTGTATGCTTGTTCAAGGA ATCCAACCAAATCAAGTGACATTTCTAGGTTCTCTTGATGCGTGCAGCAACCTTGCTGCA CTCTGTGAAGGGCAGCAGGTTCATCAGATGATATGCAAAACACCATCTCAGTTTGATACT TTTGTGGAATCCACTCTAATGAACTTATATGCCAAGTGTGGTGAAATTAGGCTGGCAAGA AATGTGTTTGATTTCTCAATGGAGAAGGACTTAATCTCATGGAATGGGATAATCGCAGCA TATGCACATCATGGGTTTGGCATAGAAGCAATGCATTTGTACAAAAATATGCAAGAAAAT GGTTATAAGCCTAATGATGCTACCTATGTGGGATTGCTCTCAGCATGTAGCCACGCCGGT TTAGTGGATGAAGGGCTTAAGATCTTTGAATCCATGGTAAAGGATAACTCCATTGTAGTG CGTGATGAACATTACACTTGCTTGGTTGATCTTTGTAGCCGAGCTGGACGGCTTGAGGAT GCTAAAAGATTAATTAGCTGGTTCAAGATTAAACCTACATCAAGTACCGTTTGGAGTGCC CTTCTAGGTGGATGCAATTCACATGGAAATGAAAGTATTGGTGATTTAGCGGCTAAACAT CTCTTGGAAGCAGAACCTGATAATGCTGGAACTTATACTCTCTTGTGTAACATTTATGCT TCAGCTGGTAAATGGAAAGAAGCAGCAGAAATTAGGTCAGAGATGAATGTTCGAGGGCTA AAGAAACAGCCAGGGTGTAGTTGGATCGAGGTGGCAAATAAGGTTCATGTATTTGTTTCC CGTGATAAATCCCACAGTGAATCTGACTTGATCAATGATCTGCTGCAGGATATTCATCGC ATTATGAGAATGGCTGGTACTGTTCCCAGGGACCATATGCTTATTGATGTGGAGCTAGTG GGGATTTAA

Peptide Sequence

PEP ID	Os11t0433101-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:13986611:13988517:1 gene:Os11g0433101 transcript:Os11t0433101-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0433101-00)
Sequence	MAALAAPALRRLRSPRLCLAATVNCISNNAAPAASAGVNHVQDSNWRVAELAAAGRVSDA RRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDARRNVVTWTALLSGYARARRV DEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSG SLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYAR NHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGY LQCMQSEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDT FVESTLMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQEN GYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLED AKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYA SAGKWKEAAEIRSEMNVRGLKKQPGCSWIEVANKVHVFVSRDKSHSESDLINDLLQDIHR IMRMAGTVPRDHMLIDVELVGI

Transcript Sequence

Transcript ID	Os11t0433101-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:13986611:13988517:1 gene:Os11g0433101 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os11t0433101-00)
Sequence	ATGGCAGCTTTGGCTGCGCCCGCGCTGCGCCGTCTCCGCTCGCCGCGGCTCTGCCTTGCC GCCACGGTCAATTGCATCAGCAACAATGCCGCCCCGGCCGCATCCGCTGGGGTCAACCAT GTGCAGGACTCGAACTGGCGCGTCGCGGAGCTGGCCGCGGCCGGGCGAGTCTCGGACGCC CGCAGGCTGTTCGACGGAATGCCCGACCGGGACGTGGTGTCGTGGACGGCGATGGTCGCC GCGTACGCGCGCCGGGGCATGCTCCAGGAGGCGCGGGTGCTGTTCGACCGCCCTGATGCG CGCCGGAACGTGGTCACCTGGACGGCGCTGCTCTCCGGCTACGCGCGCGCACGCCGCGTT GACGAGGCCGAGGCCCTCTTCGAGGGCATGGCGGAGAGGAACGTCGTCTCTTGGAACACG ATGCTGGAGGCGTATACCGCAGTTGGCCGCGTCGAGGATGCGTCTGCCCTTTTCAATCGC ATGCCGGTGAGGGATGCTGGCTCTTGGAACATTCTTCTGTGTGGACTTGTGCGGTCAGGG AGTTTGGAGAGGGCTCGTAAGATGTTTGAGAGAATGCCAGTGAGGGATGTCATGTCATGG ACCACAATGATTTCTGGCCTTGCACGGAATGGAAGCGTTGACGACGCTTGGGTTCTGTTT GATGCCATGCCAGAGAGGAATGTTGTTTCTTGGAATGCCATGATCTCTGGGTATGCACGA AACCACAGGATTGAGGAAGCACTTGATTTGTTCACGAAGATGCCTATTAGGGATGTTGCT TCTTGGAACATTATGATCACTGGCTTTATCCAGAACAAAGACTTGAAGAGTGCACGGCAA CTTTTTGATGAGATGCCTAAAAGGAATGTGATCACTTGGACCACCATGATGAATGGTTAC TTACAATGCATGCAGAGTGAAATGGCACTAAAATTATTTAACTGTATGCTTGTTCAAGGA ATCCAACCAAATCAAGTGACATTTCTAGGTTCTCTTGATGCGTGCAGCAACCTTGCTGCA CTCTGTGAAGGGCAGCAGGTTCATCAGATGATATGCAAAACACCATCTCAGTTTGATACT TTTGTGGAATCCACTCTAATGAACTTATATGCCAAGTGTGGTGAAATTAGGCTGGCAAGA AATGTGTTTGATTTCTCAATGGAGAAGGACTTAATCTCATGGAATGGGATAATCGCAGCA TATGCACATCATGGGTTTGGCATAGAAGCAATGCATTTGTACAAAAATATGCAAGAAAAT GGTTATAAGCCTAATGATGCTACCTATGTGGGATTGCTCTCAGCATGTAGCCACGCCGGT TTAGTGGATGAAGGGCTTAAGATCTTTGAATCCATGGTAAAGGATAACTCCATTGTAGTG CGTGATGAACATTACACTTGCTTGGTTGATCTTTGTAGCCGAGCTGGACGGCTTGAGGAT GCTAAAAGATTAATTAGCTGGTTCAAGATTAAACCTACATCAAGTACCGTTTGGAGTGCC CTTCTAGGTGGATGCAATTCACATGGAAATGAAAGTATTGGTGATTTAGCGGCTAAACAT CTCTTGGAAGCAGAACCTGATAATGCTGGAACTTATACTCTCTTGTGTAACATTTATGCT TCAGCTGGTAAATGGAAAGAAGCAGCAGAAATTAGGTCAGAGATGAATGTTCGAGGGCTA AAGAAACAGCCAGGGTGTAGTTGGATCGAGGTGGCAAATAAGGTTCATGTATTTGTTTCC CGTGATAAATCCCACAGTGAATCTGACTTGATCAATGATCTGCTGCAGGATATTCATCGC ATTATGAGAATGGCTGGTACTGTTCCCAGGGACCATATGCTTATTGATGTGGAGCTAGTG GGGATTTAAAAGTAAATAAAATGATGAATGTCCGATTAATTTTCCAG